Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_47850 |
Symbol | |
ID | 4384687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4257154 |
End bp | 4258269 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639326413 |
Product | hypothetical protein |
Protein accession | YP_791978 |
Protein GI | 116049219 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00000392863 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCCG AGGTCATCGT GGTCGGCGCC GGCATCGTCG GCAGCGCCTG CGCCCATGAA CTGGCGTGTC GCGGCCTCGA CGTGCTGGTG CTGGACAGCC GCCGCGGCGG CGCCACCGCG GTGGGCATGG GGCACCTGGT GGCGATGGAC GACAACCCGG CCGAACTGGC CCTCAGCGAC TACTCGATCC AGGCCTGGCG CACCTGGGCG GCGGATCTGC CGGAAGACTG CGCGTACCGC AATTGCGGCA CCCTCTGGCT GGCCGCCGAC GCCGCCGAAC TCGCCGAAGC CGAGCGCAAG CGCCAGGCCC TGCTGGCCGC CGGCGTCGCC TGCGAGATGC TCGACGCCGC GCGCCTGCGT GACCTGGAAC CGGTCTTGCG GCCAGGCCTC GCCGGCGCCC TGAAGGTGCC GGGCGACGGC ATCCTCTACG CGCCCAACGC GGCGCGCTGG CTGCTCGAAC GAGCCGGCCC GCGCCTGCTT CGATTGCACG CCGAAGTCAG CGAAGTGGAC GGCAGCCGCC TGCGCCTGGC CGACGGCCGC TGGCTGAGCG CCGAGGCGCT GGTGCTGGCC AACGGCATCC ATGCCGGCGA GCTGTGCGCG GAGCTGCCGA TCCGCCCGAA GAAAGGCCAC CTGCTGATCA CCGACCGCTA TCCCGGCACC CTCCGCCATC AACTGGTGGA ACTCGGCTAT GTCAGCAGCG CCCACGCCAG CAGCGGTACC TCGGTAGCCT TCAACGCCCA GCCGCGCCCC ACCGGGCAGA TCTTCCTCGG CTCCTCGCGG CAGTTCGACA CGCTCGACCC GCAGGTGGAA GGCCCGGTGC TGGCGCGCAT GCTGCGGCGT GCCCTGGACT ACCTGCCGGG GCTCGCCGGC CTCAATGCGA TCCGTGCCTG GACCGGCTTC CGCGCCGCCA CTCCGGACGG CCTGCCGCTG CTCGGCGAGC ACCCGGCGCA GCCGGGCCTG TGGCTGGCGG TCGGCCACGA GGGCCTGGGC GTGACCACCG CGCCGGGCAG CGCGCGCCTG CTCGCCGCCC AGTTGTTCGG CGAAACGCCG CCGCTGGATC CCACGCCTTA TCTGCCGCAA CGCTTCCTCT CCAGCTCCGG GAGTGCCCGG CCATGA
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Protein sequence | MNAEVIVVGA GIVGSACAHE LACRGLDVLV LDSRRGGATA VGMGHLVAMD DNPAELALSD YSIQAWRTWA ADLPEDCAYR NCGTLWLAAD AAELAEAERK RQALLAAGVA CEMLDAARLR DLEPVLRPGL AGALKVPGDG ILYAPNAARW LLERAGPRLL RLHAEVSEVD GSRLRLADGR WLSAEALVLA NGIHAGELCA ELPIRPKKGH LLITDRYPGT LRHQLVELGY VSSAHASSGT SVAFNAQPRP TGQIFLGSSR QFDTLDPQVE GPVLARMLRR ALDYLPGLAG LNAIRAWTGF RAATPDGLPL LGEHPAQPGL WLAVGHEGLG VTTAPGSARL LAAQLFGETP PLDPTPYLPQ RFLSSSGSAR P
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