| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_47730 |
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| Symbol | cobD |
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| ID | 4384695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4247335 |
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| End bp | 4248273 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639326405 |
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| Product | cobalamin biosynthesis protein |
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| Protein accession | YP_791970 |
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| Protein GI | 116049227 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | [TIGR00380] cobalamin biosynthesis protein CobD |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.452767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAC TGCTGGGTAT CCTCGGCGTG GCGCTGGATG CGCGCTTCGG CGAGCCGCAG
GGCTGGCACC CGCTGGTCGC CTTCGGCCGC CTGGCCGATC GCCTGGAGCG CCGTTTCAAC
CGCTCGCGCC TGGCCGGCGA GGGCGATCCC GGGGTCGGCT GGCGCAGCCA CGGGGTGACC
GCCTGGGTCC TCGCGGTACT GCCGCTGACC CTGCTGGCCT GGGCGCTCGC TGAACTTCCC
TACCTCGGCT GGCTGGTCCA GGCCCTGGCG CTGTACGCCG CGCTCGGCCT GCGCAGCCTC
GGCGAGCACG CCGAACCGGT GGCACTGGCC TTGCGCGCCG GCGACCTGGA CGAGGCGCGG
CGACGTGTCG GCTACCTGGT CAGCCGCGAT ACCCGCGAGC TGGACCAGGC CGGGGTCGCC
CGCGCGGCCA CCGAATCGGT ACTGGAGAAC GGCAGCGACG CGGTCTACGC CGCGCTGTTC
TGGTTCGCCG TGGCCGGCGC GCCGGGGGTG GTGCTGTATC GCCTGAGCAA TACCCTGGAC
GCGATGTGGG GCTACCGCAA CGCGCGCTTC GAGCGCTTCG GCTGGGCCGC GGCGAAGATC
GACGACATCC TCAACTACCT GCCGGCGCGG CTGGTGGCGC TGACCTACGC GCTGCTCGGC
GGCACCCGCC AGGCCCTGCG CTGCTGGCGC GAGCAGGCGC CGCAATGGGA CAGCCCCAAC
GCCGGCCCGG TGATGGCCGC CGGCGCCGGT GCGCTGGGGG TTTCCCTGGG CGGCGCGGCG
ATCTACCACG GCGAGCTGCA CCAGCGGCCG CTCCTCGGCA GCGGCCCGCA GCCGCAGGGC
CGCGACATCT ATCGGGCCCT GGCGCTGGTA CGCCAGGGCG TGCTGCTCTG GCTGCTGGTG
CTGGCCGGAC TCTGGGCCAT GGGGTGGCTG CATGCTTGA
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| Protein sequence | MSALLGILGV ALDARFGEPQ GWHPLVAFGR LADRLERRFN RSRLAGEGDP GVGWRSHGVT
AWVLAVLPLT LLAWALAELP YLGWLVQALA LYAALGLRSL GEHAEPVALA LRAGDLDEAR
RRVGYLVSRD TRELDQAGVA RAATESVLEN GSDAVYAALF WFAVAGAPGV VLYRLSNTLD
AMWGYRNARF ERFGWAAAKI DDILNYLPAR LVALTYALLG GTRQALRCWR EQAPQWDSPN
AGPVMAAGAG ALGVSLGGAA IYHGELHQRP LLGSGPQPQG RDIYRALALV RQGVLLWLLV
LAGLWAMGWL HA
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