Gene PA14_47100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_47100 
SymbolilvA2 
ID4384511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4196019 
End bp4197566 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content69% 
IMG OID639326354 
Productthreonine dehydratase 
Protein accessionYP_791919 
Protein GI116049278 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01124] threonine ammonia-lyase, biosynthetic, long form 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCT CGACCCTCAG CGCAAGCAAA CCCCTGCTGG CCGGCTACGT GGAAAGCATC 
CTGGCCGCGC CGGTGTACGA CGTCGCCGTG GAAACCCCCT TGCAGGTCGC GCCGCAGTTG
TCCCAGCGCC TGGGCAACCG GGTGCTGCTC AAGCGCGAGG ACCTGCAGCC GGTGTTCTCC
TTCAAGATCC GCGGCGCCTA TACCCGTGTC GCGCGCCTGA GCGACGAGCA GAAGGCCCGC
GGGGTGATCA CCGCCTCCGC CGGCAACCAT GCCCAGGGCC TGGCCCTGGC GGCGCAGCGC
CTGGGCGTGC GGGCGGTGAT CGTGATGCCG CGCACCACTC CCGAGCTCAA GGTCAAGGGC
GTGCTGGCGC GCGGCGGCGA GGCGTTGCTG CACGGCGACG CTTTCCCCGA TGCGCTGGCC
CATGCCCTGC AACTGGCCGA GCGCGAAGGC ATGACCTTCG TCCCGCCCTA CGACGATCCG
GACGTGATCG CCGGACAGGG CACGGTGGCG ATGGAGATCC TCCGCCAGCA CAGCGGCCGC
CTCGACGCGA TCTTCGTGCC GGTCGGCGGC GGCAGCCTGA TTGCCGGGAT CGCCGCCTAC
GTCAAGCACC TGCGTCCGGA TATCCGCGTG ATCGGCGTCG AGCCGGAGGA TTCCAACTGC
CTGCAGGCGG CGCTGGCCGC CGGCGAACGG GTGGTGCTGG GCCAGGTCGG GCTGTTCGCC
GACGGGGTGG CGGTGGCGCA GATCGGCGCT TGCAACTTCG AGGTCTGCAA GGACCATGTC
GACGAGGTGA TCACCGTCGG CAGCGACGAA ATCTGCGCGG CGATCAAGGA CATCTACGAC
GACACCCGTT CGATCACCGA GCCGGCCGGC GCCCTGGCCG TAGCGGGGAT CAAGAAGTAC
GTGGCCCGCG AACGCACCGA GGGGCAGACC CTGGTGGCCA TCGACTCCGG TGCCAACATC
AACTTCGACC GCCTGCGCCA CGTTGCCGAG CGCGCCGAAC TGGGCGAACA GCGCGAAGCG
ATCATCGCCG TCACCGTGGC CGAGCGGCCG GGCAGCTTCA AGGCCTTCTG CGCGGCGCTG
GGCCGGCGCC AGATCACCGA GTTCAACTAC CGCTACCACA GCGACCGCCA GGCCCACCTG
TTCGTCGGCG TGCAGACCCA TCCGCTCACC GACAGTCGCG CCGACCTGCT CGCCGGCCTG
CGTGAGCAGG GCTTCCCGGT ACTCGACCTG ACCGACAACG AGATGGCCAA GCTGCACATC
CGCCACATGG TCGGCGGCCA CGGTACCGAG GTGCGCCGCG AGCGGCTGTT CCGCTTCGAG
TTTCCCGAAC GCCCCGGGGC CTTGCTGAAC TTTCTCGACA AGCTCGGCTC GCGCTGGAAC
ATCAGCCTGT TCCACTACCG CAACCACGGC GCCGCCGACG GTCGGGTGCT GGCCGGATTG
CAGGTGCCGG ACGAGGAGCG CGGCGAGCTG GAGGCGGCGT TGCAAGCCAT CGGCTATCCG
TACTGGGAGG AAACCCACAA CCCGGCCTAC CGGCTGTTCG CCGGTTGA
 
Protein sequence
MSASTLSASK PLLAGYVESI LAAPVYDVAV ETPLQVAPQL SQRLGNRVLL KREDLQPVFS 
FKIRGAYTRV ARLSDEQKAR GVITASAGNH AQGLALAAQR LGVRAVIVMP RTTPELKVKG
VLARGGEALL HGDAFPDALA HALQLAEREG MTFVPPYDDP DVIAGQGTVA MEILRQHSGR
LDAIFVPVGG GSLIAGIAAY VKHLRPDIRV IGVEPEDSNC LQAALAAGER VVLGQVGLFA
DGVAVAQIGA CNFEVCKDHV DEVITVGSDE ICAAIKDIYD DTRSITEPAG ALAVAGIKKY
VARERTEGQT LVAIDSGANI NFDRLRHVAE RAELGEQREA IIAVTVAERP GSFKAFCAAL
GRRQITEFNY RYHSDRQAHL FVGVQTHPLT DSRADLLAGL REQGFPVLDL TDNEMAKLHI
RHMVGGHGTE VRRERLFRFE FPERPGALLN FLDKLGSRWN ISLFHYRNHG AADGRVLAGL
QVPDEERGEL EAALQAIGYP YWEETHNPAY RLFAG