Gene PA14_46990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_46990 
Symbol 
ID4384520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4186144 
End bp4187421 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content69% 
IMG OID639326345 
Productputative two-component response regulator 
Protein accessionYP_791910 
Protein GI116049287 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0103448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.161007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCGGCT GCCAGCAGGC GCTGGAGCTG GAGGACATCC CCTGCATCGG CGTCGGCAGC 
GCCGAGGAGG CGCTGCAACG GGTCGACCGC GACTTCGCCG GCATCGTCGT CAGCGACATC
CGCCTGCCCG GCATCGACGG CCTGACCCTG CTGGAGCGTC TCAAGGCCCT CGACCCGAGC
CTGCCGGTGG TGCTGATCAC CGGTCACGGC GACATCTCCA TGGCGGTACA GGCGATGCAC
GCCGGCGCCT ACGACTTCAT GGAGAAGCCC TTCTCTCCGG AACGCCTGGT CGAGGTCGCC
CGCCGCGCCC TGGAGCAGCG CGGGCTGGCC CGCGAGGTCA GCGCGCTGCG TCGCCAGTTG
GCCGGCCGCC AGGACCTGGC GCAACGGATC ATCGGCCGCT CGCCGGCGAT CCAGGCGTTG
CGCGAGCTGA TCGCCAACGT CGGCGACACC TCGGCCAACG TGCTGATCCT CGGCGAGACC
GGCACCGGCA AGGAGCTGGT GGCGCGCTGC CTCCACGACT ACAGCCGGCG CCACCAGCAT
GCCTTCGTCG CGCTGAACTG CGGCGGCCTG CCGGAGAACC TGTTCGACAG CGAGATATTC
GGCCACGAGG CGCACGCCTT CACCGGTGCC AACAAGCGGC GGATCGGCAA GATCGAGCAT
GCCAACGGCG GCACGCTGTT CCTCGACGAG ATCGAGAGCA TGCCGGTCAA CCTGCAGATC
AAGCTGCTGC GGGTGTTGCA GGAACACACC CTGGAACGCC TCGGCTCGAA CCAGTCGATC
CCGGTGGACT GCCGGGTGAT CGCGGCGACC AAGGCGGACC TCGCCGCCAT GGGCAAGAGC
GGCCAGTTCC GCAGCGACCT CTACTACCGG CTCAACGTGG TGAGCCTGGA ACTGCCGGCA
CTGCGCGACC GCCGCGAGGA CATCCTGCTG CTCTTCGAAC ACTTCCTTCA GCAATCCTCG
CTGCGCTTCG ACCGCCCCGC GCCGGAACTC GACCGTGCCA CCGTGGCCAG CCTGATGGCC
CACGACTGGC CGGGCAACGT GCGCGAACTG CGCAACGTCG CCGAACGCTT CGCCCTCGGC
CTGCCGGTGT TCAACAAGGG CGGCCAGGCC GTACAGACCG GCGGCCCGCG CTTCGCCGAA
GCGGTGGAGG CATTCGAGAA GGCCCTGCTC GGCGACGCCC TGGCCCGCCA CCACGGCAAC
CTGACCCAGG CCAGCCAGGA CCTGGGCATG GCCAAGACCA CGCTGTTCGA CAAGGTGAAG
AAGTACGGCC TGCAATAG
 
Protein sequence
MLGCQQALEL EDIPCIGVGS AEEALQRVDR DFAGIVVSDI RLPGIDGLTL LERLKALDPS 
LPVVLITGHG DISMAVQAMH AGAYDFMEKP FSPERLVEVA RRALEQRGLA REVSALRRQL
AGRQDLAQRI IGRSPAIQAL RELIANVGDT SANVLILGET GTGKELVARC LHDYSRRHQH
AFVALNCGGL PENLFDSEIF GHEAHAFTGA NKRRIGKIEH ANGGTLFLDE IESMPVNLQI
KLLRVLQEHT LERLGSNQSI PVDCRVIAAT KADLAAMGKS GQFRSDLYYR LNVVSLELPA
LRDRREDILL LFEHFLQQSS LRFDRPAPEL DRATVASLMA HDWPGNVREL RNVAERFALG
LPVFNKGGQA VQTGGPRFAE AVEAFEKALL GDALARHHGN LTQASQDLGM AKTTLFDKVK
KYGLQ