Gene PA14_46950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_46950 
Symbol 
ID4384524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4180443 
End bp4181177 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content64% 
IMG OID639326341 
Productputative ATP-binding component of ABC transporter 
Protein accessionYP_791906 
Protein GI116049291 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.832772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00625095 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTTCCA TCAAGAATGT CAGCAAGTGG TATGGCGACT TCCAGGTCCT GACCGACTGC 
TCCACCGAGG TTGCGAAAGG CGAAGTGGTG GTGGTCTGCG GGCCGTCCGG CTCGGGCAAG
TCGACCCTGA TCAAGTGCGT CAACGCACTG GAACCCTTCC AGAAGGGCGA CATCGTCGTC
GACGGCACCT CCATCGCCGA TCCGAAGACC AACCTGCCCA AGCTGCGCTC GCGGGTCGGC
ATGGTGTTCC AGCATTTCGA GCTGTTCCCC CACCTGAGCA TCACCGAGAA CCTGACCATC
GCGCAGATCA AGGTGCTCGG CCGCAGCAAG GAAGAAGCCA CCAAGAAGGG CCTGGCCCTG
CTCGAGCGCG TCGGTCTCAA GGAGCACGCG CACAAGCACC CCGGCCAGCT CTCCGGCGGC
CAGCAGCAGC GCGTGGCGAT CGCCCGCGCG CTGGCGATGG ACCCGGTGGT GATGCTGTTC
GACGAGCCGA CCTCGGCGCT CGACCCGGAA ATGGTCAACG AAGTGCTCGA CGTGATGGTC
CAGCTGGCCC ACGAAGGCAT GACCATGATG TGCGTGACCC ACGAGATGGG CTTCGCGCGC
AAGGTCGCCA ACCGGGTGAT CTTCATGGAC CGCGGGCAGA TCGTGGAAGA CTGCGAGAAG
GAGGAGTTCT TCGGCGACGT CAGCGCCCGC TCCGAACGCG CCCAGCAGTT CCTCGCCAAG
ATCCTCCCGC ACTGA
 
Protein sequence
MISIKNVSKW YGDFQVLTDC STEVAKGEVV VVCGPSGSGK STLIKCVNAL EPFQKGDIVV 
DGTSIADPKT NLPKLRSRVG MVFQHFELFP HLSITENLTI AQIKVLGRSK EEATKKGLAL
LERVGLKEHA HKHPGQLSGG QQQRVAIARA LAMDPVVMLF DEPTSALDPE MVNEVLDVMV
QLAHEGMTMM CVTHEMGFAR KVANRVIFMD RGQIVEDCEK EEFFGDVSAR SERAQQFLAK
ILPH