| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_46590 |
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| Symbol | |
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| ID | 4382287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 4147938 |
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| End bp | 4151027 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639326310 |
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| Product | putative AcrB/AcrD/AcrF family protein |
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| Protein accession | YP_791875 |
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| Protein GI | 116049322 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000144683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00000801184 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAA GTCGTTTCAA CCTCTCCGCC CTCGCCGTGC GCGAGCGCTC CGTCACCCTG
TTCCTGGTCT GCCTGATCTC CCTGGCGGGT CTCGTCGCCT TCTTCAAGCT GGGGCGTGCC
GAAGACCCGG CCTTCACCAT CAAGGTCATG ACCATCGTCA CCGCCTGGCC GGGCGCCACC
GCCCAGGAAA TGCAGGATCA GGTCGCCGAG AAGATCGAGA AGCGCCTGCA GGAACTGCGC
TGGTACGACC GCAGCGAAAC CTATACACGC CCGGGGCTGG CCTTCACCAC CCTGTCGCTG
CTCGACACCA CCCCACCCTC GGAGGTGCTC GAGGAGTTCT ACCAGGCGCG CAAGAAGATC
AGCGACGAGG CCAAGACGCT GCCTACCGGG GTGATCGGCC CGCTGGTCAA CGATGAGTAT
TCGGACGTCA CCTTCGCCCT GTTCGCGCTC AAAGCCAGGG GCGAGCCGCA ACGCCACCTG
GTGCGCGACG CCGAGACCCT GCGTCAGCGC CTGCTGCATG TACCGGGCGT GAAGAAGGTC
AACATCATCG GCGAACAGGC CGAGCGCATC TTCGTCGAGT TCTCCCACGA GCGCCTGGCC
ACCCTGGGCA TCGGTCCCCA GGACGTGTTC GCCGCGCTCA ACGGGCAGAA CGCCCTGACC
CCGGCCGGCT CCGTGGAAAC CCGTGGCCCC GACGTGTTCC TGCGTCTGGA CGGTGCCTTC
GATGAGCTAG AGAAGATTCG TGACACTCCG ATCATCGCCC AAGGCCGCAC CTTGAAGCTT
TCCGATGTTG CCACGGTCAA GCGCGGCTAC GAAGACCCGG CCACCTTTCT GATTCGCAAC
GGCGGCGAAC CGGCCCTGTT GCTCGGCATC ATCATGCGTG AAGGCTGGAA CGGGCTCGAC
CTGGGCAAGG CCTTGAACGA TGAAGTGCAG CAGATCAACG CTGAGCTGCC GCTGGGCATG
AGCCTGAGCA AGGTCACCGA CCAGGCCGTC AACATCAGCG CGTCCGTCGA CGAGTTCATG
ATCAAGTTCT TCGTCGCGCT GCTGGTGGTG ATGCTGGTGT GCTTCGTCAG CATGGGCTGG
CGCGTCGGCG TGGTAGTCGC GGTGGCAGTG CCGCTGACCC TGGCGATGGT CTTCGTGGTG
ATGGCCGCCA CTGGCAAGAA CTTCGACCGC ATAACCCTGG GCTCGCTGAT CCTCGCCCTT
GGCCTGCTGG TAGACGACGC CATCATCGCC ATCGAGATAA TGGTGGTGAA GATGGAGGAA
GGCTACGACC GTGTGCGGGC CTCCGCCTAT GCCTGGAGCC ACACAGCGGC GCCGATGCTC
TCCGGCACCC TGGTTACCGC CGTCGGCTTC ATGCCCAACG GCTTCGCCCG CTCCACGGCC
GGCGAATACA CCAGCAACAT GTTCTGGATC GTCGGCATCG CGCTGATCGC TTCCTGGCTG
GTCGCGGTGA TCTTCACGCC GTACTTCGGC GTCAAGCTGC TGCCCGAGAT CAAGAAGGTC
GAGGGCGGTC ACGACGCCAT CTACGACACT CCGCGCTACA ACCACTTTCG TCGGATTCTG
GGTAAGGTGA TCGCCCACAA GTGGCTGGTC GCAGGTTCAG TGATAGGGCT GTTCGTGACG
GCCGTGCTCG GCATGGCGCT GGTCAAGAAA CAGTTCTTCC CCATCTCCGA CCGCCCCGAA
GTCATGGTCG AGGTACAGAT GCCTTATGGC ACCTCGATCC TCCAGACCAG CGCAGCTGCG
GAAAAAGTCG AAGCCTGGCT GGCCCAGCAG GCAGAGGCGA AGATCGTCAC GGCGTACATC
GGCCAGGGCG CACCGCGCTT CTTCATGGCC ATGAGCCCGG AACTGCCGGA TCCGTCGTTC
GCCAAGATCG TCGTACGCAC CGACAACCCG GATGAGCGCG AGGCACTCAA GCACAGGCTG
CGCAAGGCGA TTGCCGAGGG TCTGGCCAGC GAGGCGCAGG TGCGCGTCAG TCAATTGGTG
TTCGGCCCCT ACTCGCCCTA CCCGGTGGCC TACCGGATTA GCGGCCCGGA TCCGCAACGC
CTGCGCGAGA TCGCCAGCGA GGTGCGCCAA GTGATGGATG CCAGCCCGCT GATGCGGACG
GTCAATACCG ACTGGGGCAC CCGCGCTCCC ACGCTGCACT TCAATCTGCA GCAAGATCGC
CTGCAAGCGG TGGGGCTAAC CTCCAGTGCC GTTGCGCAGC AGCTGCAGTT TTTGCTCAGC
GGCGTGCCCG TCACCGCCGT ACGCGAAGAC ATCCGCACGG TGCAGGTCAT GGCCCGTGCC
GCTGGCGATA TTCGCCTCGA CCCGGCACGG GTGATGGATT TCACCCTGGC CGGCGCCAAT
GGTCAGCGCA TCCCGCTGTC GCAGATTGGC GAAGTGGAGG TACGCATGGA AGAGCCGATC
ATGCGCTGGC GCGACCGGGT GCCGACTATC ACAGTGCGTG GCGATATCGC CGAAGGCTTG
CAACCGCCAG ACGTGTCGAC CGCCATCAGC CAGCAGTTGC AACCCATCAT CGACAGGCTG
CCGAGCGGCT ATCGCATCGA GCAAGCGGGC TCCATCGAGG AATCGGGCAA AGCCAGCAAG
GCCATGCTGC CGCTGTTCCC GATCATGCTG GCCGTCACGT TGATCATCAT CATCCTGCAG
GTGCGCTCGA TCGCCGCGAT GATCATGGTC TTTCTCACCA GCCCGCTGGG GCTGATCGGC
GTAGTGCCGA CGCTGATCCT GTTCCAGCAG CCGTTCGGCA TCAACGCGCT GGTCGGGCTG
ATCGCGCTGT CCGGCATCCT CATGCGTAAC ACGCTGATCC TGATCGGGCA GATTCGCCAG
AACGAAGCGG CGGGTCTCGA TCCGTTCCGC GCCGTGGTCG AAGCCACCGT GCAACGCGCT
CGGCCGGTGA TCCTCACCGC GCTGGCGGCG ATCCTGGCGT TCATCCCACT TACGCATTCC
GTGTTCTGGG GCACCCTCGC CTACACCCTG ATCGGCGGCA CCTTCGCCGG CACCGTGCTG
ACCCTGGTGT TCCTGCCGAC CATGTACGCC ATCTGGTTCG GCATCCGCCC CATCCCCCAC
GAGCCACTCG CGCAGGCACA ACCTGCATGA
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| Protein sequence | MSESRFNLSA LAVRERSVTL FLVCLISLAG LVAFFKLGRA EDPAFTIKVM TIVTAWPGAT
AQEMQDQVAE KIEKRLQELR WYDRSETYTR PGLAFTTLSL LDTTPPSEVL EEFYQARKKI
SDEAKTLPTG VIGPLVNDEY SDVTFALFAL KARGEPQRHL VRDAETLRQR LLHVPGVKKV
NIIGEQAERI FVEFSHERLA TLGIGPQDVF AALNGQNALT PAGSVETRGP DVFLRLDGAF
DELEKIRDTP IIAQGRTLKL SDVATVKRGY EDPATFLIRN GGEPALLLGI IMREGWNGLD
LGKALNDEVQ QINAELPLGM SLSKVTDQAV NISASVDEFM IKFFVALLVV MLVCFVSMGW
RVGVVVAVAV PLTLAMVFVV MAATGKNFDR ITLGSLILAL GLLVDDAIIA IEIMVVKMEE
GYDRVRASAY AWSHTAAPML SGTLVTAVGF MPNGFARSTA GEYTSNMFWI VGIALIASWL
VAVIFTPYFG VKLLPEIKKV EGGHDAIYDT PRYNHFRRIL GKVIAHKWLV AGSVIGLFVT
AVLGMALVKK QFFPISDRPE VMVEVQMPYG TSILQTSAAA EKVEAWLAQQ AEAKIVTAYI
GQGAPRFFMA MSPELPDPSF AKIVVRTDNP DEREALKHRL RKAIAEGLAS EAQVRVSQLV
FGPYSPYPVA YRISGPDPQR LREIASEVRQ VMDASPLMRT VNTDWGTRAP TLHFNLQQDR
LQAVGLTSSA VAQQLQFLLS GVPVTAVRED IRTVQVMARA AGDIRLDPAR VMDFTLAGAN
GQRIPLSQIG EVEVRMEEPI MRWRDRVPTI TVRGDIAEGL QPPDVSTAIS QQLQPIIDRL
PSGYRIEQAG SIEESGKASK AMLPLFPIML AVTLIIIILQ VRSIAAMIMV FLTSPLGLIG
VVPTLILFQQ PFGINALVGL IALSGILMRN TLILIGQIRQ NEAAGLDPFR AVVEATVQRA
RPVILTALAA ILAFIPLTHS VFWGTLAYTL IGGTFAGTVL TLVFLPTMYA IWFGIRPIPH
EPLAQAQPA
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