Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_46570 |
Symbol | |
ID | 4382289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4146137 |
End bp | 4146754 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639326308 |
Product | putative transcriptional regulator |
Protein accession | YP_791873 |
Protein GI | 116049324 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000000000161907 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.00000116969 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAGA CCCCCTCCCC CAAAGTTGCA GCACGTGGTC CGGTGGATCA CGAGGTGCGT GATCAGATCG TGGCAGCGGC GACCGAGCAC TTCCGCCTGT ATGGCTACGA GAAGACCACG GTTTCCGACC TGGCCAAGGC CATCGGTTTT TCCAAGGCCT ATATCTACAA GTTCTTCGAG TCCAAGCAGG CCATCGGCGA GATGATCTGC TCGAGCTGCC TGCAGCAGAT ACAGACCGAG GTGAATGCTG CCATCCATGA GGTGGACAGC CCGCCGGAGA AGCTGAGGCG CATGCTCAAG GTGCTGATGG AAGCCTGCCT GCGGCTGTTC TTCCAGGATC GCAAACTCTA CGAAATCGCC GCCTCCGCCG CCTCCGGGCG CTGGCCGGCA ACCCTGCTCT ACGAAGGCTT CATCGAGCAG ACCCTTCGCG AGATCCTGCA GCAGGGCCGG CAGAGCGGCG ACTTCGAGCG CAAGACGCCT CTGGATGAAA CCACCCGCGC GATCCACCTG ATCATGCGCC CCTATTTCAA CCCGCTGCTG CTCCAGTACG GGCTCGAAAC CACCGATGAA GCGCCGGCCC TGCTGTCCAG CCTGGTGTTG CGCAGTCTGT CACCCTGA
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Protein sequence | MNKTPSPKVA ARGPVDHEVR DQIVAAATEH FRLYGYEKTT VSDLAKAIGF SKAYIYKFFE SKQAIGEMIC SSCLQQIQTE VNAAIHEVDS PPEKLRRMLK VLMEACLRLF FQDRKLYEIA ASAASGRWPA TLLYEGFIEQ TLREILQQGR QSGDFERKTP LDETTRAIHL IMRPYFNPLL LQYGLETTDE APALLSSLVL RSLSP
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