Gene PA14_46480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_46480 
Symbol 
ID4382297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4136496 
End bp4137002 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content67% 
IMG OID639326300 
Productputative transcriptional regulator 
Protein accessionYP_791865 
Protein GI116049332 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0000073333 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.000141221 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACGCA AGACCTTCGC CGATGCCGAA TGCCCCATCG CCCGCAGCCT GGAACGGGTC 
GGCGAATGGT GGAGCATCCT GATCATGCGC GATGCGCTAC AGGGCCTGCG CCGCTTCGAC
GAATTTTCCC GCAGCCTGGA TATCGCGCCG AACATGCTCA CCCGGCGCCT GAACGCGCTG
GTGGAGGCGG GCCTGCTCGA ACGCCAGCCC TACAGCCAGC GCCCGCTGCG CTATCAGTAC
GTGCCCACGG CCAAGGGCGA GGATTTTCGC GTCGTGCTCA TGGCTTTCGT CGCCTGGGGC
AATCGCCACT ACGCAGAGGA AGGGCAGAGG GTGCAGCTCG TCGAGCGAAC AAGCGGGCGG
CCGGTGCGCT CGTTCATGGC GGCTCTCGCC GATGGCCGAA CGGTACCGCT GGAGCAATGC
ACCGTGCAGG CCGGGCCTGC CGCCAGCGAG GAAATGCGCC AGCGCCTGGC GGCCATGCCG
GAGCGGAGCG AGCTACCGGC TCGATGA
 
Protein sequence
MQRKTFADAE CPIARSLERV GEWWSILIMR DALQGLRRFD EFSRSLDIAP NMLTRRLNAL 
VEAGLLERQP YSQRPLRYQY VPTAKGEDFR VVLMAFVAWG NRHYAEEGQR VQLVERTSGR
PVRSFMAALA DGRTVPLEQC TVQAGPAASE EMRQRLAAMP ERSELPAR