| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_46330 |
|---|
| Symbol | |
|---|
| ID | 4382330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4123314 |
|---|
| End bp | 4124234 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639326287 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_791852 |
|---|
| Protein GI | 116049345 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0116434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAGC CACATGAATG GTCGCCCCTC AGCCGTTTCG ATCTGAACCT GTTCCGGGTC
TTCGAAGTGG TCTATCGAGA ACGCAACCTG ACCCGCGCGG CGGGCCTCCT GCATCTCAGC
CAGTCGGCCG TCAGCCACGC CCTGGCGCGC CTGCGCGACC AGCTCGGCGA CCCGCTGTTC
GTTCGCCAGG GGCGCGGGGT TGCGCCGACG CCGCTGGCCG ATCGACTGGC GCCGGGCATC
CATGACGCCC TCGCCGGCCT GCACCGCAGC ATGAATCGCT GCCAGACATT CGACCCTCGG
CGCGACGCGC GGACCTTCCA GTTGAACATG CCGGAGCAAC TGGAGCCGCT GGTGCTCCCG
GCGATCCTCG ACCACCTGCG CCAGGCCGCG CCGCGCATCG AGATACGCTG CAACAGCCTG
CACTGGGCGG ACCTGAAGGC GGAACTGGGC GCCGGACGCA TCGACCTCGC CATCGAGATC
GCCCGGCCCA CCGACGCCGC CCTGCGCCGC CAGCACCTGC TCGACGACAG CCTGTGCGTG
ATGGCCGGGC CGGGCTTCGC CGGCGACCTG AGTGCGGAGG AGTACCTGGC GGCGGACCAT
GTCGCGGTGA CCTCGCGGCG ACGCGGCATC TGCATCGAAG ACCTGGCCCT CGGCCACCTC
GGCCTGACCC GCCAGGTGCG CCAGCGCTGC CAGCACTACC TGTCGGCGGC GTTGCTGGTG
GCCCAGGGCA GCTACCTGCT GACCCTGACC CGAGGCTACG CCGAACTGAT CAACCGCGGC
CTGGGCAACC GCCTGCTGCC GATGCCGCTG GCCCTGCCAG CGGTGACTCT GAATCTCTAC
TGGTCGCGCC AGGCCGACGA CGAAGCCGGC AGCCTCTGGC TGCGCGGCGA ACTGGCGGAG
TTGGCGACGC GCCTGCGCTG A
|
|---|
| Protein sequence | MNQPHEWSPL SRFDLNLFRV FEVVYRERNL TRAAGLLHLS QSAVSHALAR LRDQLGDPLF
VRQGRGVAPT PLADRLAPGI HDALAGLHRS MNRCQTFDPR RDARTFQLNM PEQLEPLVLP
AILDHLRQAA PRIEIRCNSL HWADLKAELG AGRIDLAIEI ARPTDAALRR QHLLDDSLCV
MAGPGFAGDL SAEEYLAADH VAVTSRRRGI CIEDLALGHL GLTRQVRQRC QHYLSAALLV
AQGSYLLTLT RGYAELINRG LGNRLLPMPL ALPAVTLNLY WSRQADDEAG SLWLRGELAE
LATRLR
|
|---|
| |