| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_46230 |
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| Symbol | aphA |
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| ID | 4382301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4109939 |
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| End bp | 4110979 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639326277 |
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| Product | acetylpolyamine aminohydrolase |
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| Protein accession | YP_791842 |
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| Protein GI | 116049355 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.352014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0157531 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCG TCTACAGCGA CGATCATCGT CTGCACTTCG GCCAGTCGGA ACTGGTCGAC
GGCAAGCTGC AACCCTGTTT CGAAATGCCC AGCCGGGCCG ACACCGTGCT GGCCCGGGTG
AAGTCGCAGA ACCTTGGCGA GGTGATCGCG CCGAAGGATT TCGGCCGCGA GCCGCTGCTG
CGCATCCACG ACGCCGCCTA CCTGGACTTC CTCCAGGGCG CCTGGGCCCG CTGGACCGCC
GAAGGCCACA GCGGCGACCT GGTGTCCACC ACCTTCCCCG GCCGCCGCCT GCGCCGCGAC
GGGCCGATCC CCACGGCGCT GATGGGCGAG CTGGGCTACT ACAGCTTCGA CACCGAGGCG
CCGATCACCG CCGGCACCTG GCAGGCCATC TACAGCTCCG CCCAGGTCGC GCTGACCGCC
CAGGAGCATA TGCGCCAGGG CGCCCGCAGC GCCTTCGCTC TCTGCCGTCC GCCGGGCCAT
CACGCCGGTG GCGACTTCAT GGGCGGCTAC TGCTTCCTCA ACAATGCCGC CATCGCCACC
CAGGCGTTCC TCGACCAGGG CGCCCGGCGC GTGGCGATCC TTGATGTCGA CTATCACCAT
GGCAACGGCA CGCAGGATAT CTTCTACCGC CGCGACGACG TGCTGTTCGC CTCGATCCAT
GGCGATCCGC GGGTCGAATA CCCGTACTTC CTCGGCTACG CCGACGAGCG CGGCGAAGGC
GCCGGCGAGG GCTGCAACCA CAACTATCCG CTGGCCCATA GCAGCGGCTG GGACCTCTGG
TCGGCGGCGC TCGACGACGC CTGCGTGCGG ATCGCCGGCT ACGCCCCGGA TGCCCTGGTG
ATTTCCCTCG GCGTGGACAC CTACAAGGAA GACCCGATCT CCCAGTTCAG GCTGGATTCG
CCGGACTACC TGCGGATGGG CGAGCGCATC GCCCGGCTGG GCCTGCCGAC CCTGTTCATC
ATGGAAGGCG GCTATGCGGT GGAAGCCATC GGCATCAACG CGGTCAACGT GCTGCAGGGC
TACGAAGGCG CGGCCCGCTG A
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| Protein sequence | MLSVYSDDHR LHFGQSELVD GKLQPCFEMP SRADTVLARV KSQNLGEVIA PKDFGREPLL
RIHDAAYLDF LQGAWARWTA EGHSGDLVST TFPGRRLRRD GPIPTALMGE LGYYSFDTEA
PITAGTWQAI YSSAQVALTA QEHMRQGARS AFALCRPPGH HAGGDFMGGY CFLNNAAIAT
QAFLDQGARR VAILDVDYHH GNGTQDIFYR RDDVLFASIH GDPRVEYPYF LGYADERGEG
AGEGCNHNYP LAHSSGWDLW SAALDDACVR IAGYAPDALV ISLGVDTYKE DPISQFRLDS
PDYLRMGERI ARLGLPTLFI MEGGYAVEAI GINAVNVLQG YEGAAR
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