Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_46170 |
Symbol | |
ID | 4382305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4105600 |
End bp | 4106472 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639326273 |
Product | LysR family transcriptional regulator |
Protein accession | YP_791838 |
Protein GI | 116049359 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0324298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGTTCG GCCAGTTGAG GATCTTCCAG GCGGTCGCCG AGGAAGGCTC CATCGCCCGC GCCGCCGAGC GCCTGCACCG GGTGCCGTCG AACCTGTCGA CGCGCCTGCG GCAACTGGAG GAACAGCTTG GCGTCGACCT GTTCCTCCGC GAACGCCAGC GCCTGCAACT GTCGCCGGCC GGCAAGGTCC TGCTGGACTA CGCCGCGCGG CTGTTCGCCC TGCAGGAGGA GGCGCGCGCG GCGGTGCAGG GAGGCGAACC GGTGGGCGAC TTCGCCCTCG GCTCGATGTA CAGCACCGCG GCGATCCACC TGCCGCCGCG CCTGGCGGAA TACCACCGGC GCTATCCGGC GGTGAACCTG CAATTGCAGA CCGCGCCCAG CGGCGAGCTG GTCGAGTCGC TGCTGGGCGG GCGCCTGGAC GCCGTGCTGG TGGACGGCCC GCTGGACTTC GACGGTCTGG AGGGCCTGCC GATGTTCGAG GAGCGCATGG TGCTGGTCAC CGAGAATGGC CACCCGCCGG TGCGCGGTCC CGAGGACGTG GCCGGCAGCG CGGTGATCGC CTTCCGCCCG CGCTGCTCCT ATCGCCTGCT GCTGGAGTCC TGGTTCGCCA GCGCGCGGGT GAGCATGGGC CGGGTGATGG AGATCGAGTC CTACCACAGC ATGCTGGCCT GCGTGGTGGC CGGCGGCGGG GTGGCGCTGA TGCCGGTGTC GATGCTGCAA AGCCTGCCGG GGCGGGAGTC GGTGGCGGTG CATGCGCTGG CCGAACCGTT CGCCCGGGCG AGTACCTGGC TGGTCTGGCG CAAGGGCATG GTCGGCGCCA ACCTGAAGGC CTGGATCGGT CTTCTGCAAG GGCGGGAATC GGCGTTGGCT TGA
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Protein sequence | MEFGQLRIFQ AVAEEGSIAR AAERLHRVPS NLSTRLRQLE EQLGVDLFLR ERQRLQLSPA GKVLLDYAAR LFALQEEARA AVQGGEPVGD FALGSMYSTA AIHLPPRLAE YHRRYPAVNL QLQTAPSGEL VESLLGGRLD AVLVDGPLDF DGLEGLPMFE ERMVLVTENG HPPVRGPEDV AGSAVIAFRP RCSYRLLLES WFASARVSMG RVMEIESYHS MLACVVAGGG VALMPVSMLQ SLPGRESVAV HALAEPFARA STWLVWRKGM VGANLKAWIG LLQGRESALA
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