Gene PA14_46110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_46110 
Symbol 
ID4382310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4100014 
End bp4101405 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content68% 
IMG OID639326268 
Productputative sodium:solute symport protein 
Protein accessionYP_791833 
Protein GI116049364 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0497302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.205453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCG ACATATTCGT CGTTCTGATC TACGCCGCGG GCATGATCGC GCTGGGCTGG 
TACGGCATGC GCCGCGCCAA GACCCGCGAC GACTACCTGG TGGCCGGCCG CAACCTCGGC
CCCGGCTTCT ACCTGGGAAC CATGGCCGCC ACCGTCCTCG GCGGCGCCTC CACCATCGGC
ACCGTGCGCC TGGGCTACGT CCATGGCATC TCCGGCTTCT GGCTGTGCGG CGCGATCGGC
CTCGGCATCG TCGGCCTCAG CCTGTTCCTG GCCAAGCCGC TGCTGAAGCT GAAGATCTAC
ACCGTCACCC AGGTCCTGGA GCGTCGCTAC AACCCCGCCG CGCGCCACGC CAGCGCCCTG
ATCATGCTGG TCTACGCACT GATGATCGGC GCCACCTCGA CCATCGCCAT CGGCACCGTC
ATGCAGGTCC TGTTCGGCCT GCCGTTCTGG GTCTCGATCC TGATCGGCGG CGGCGTCGTG
GTGCTCTACT CCACCATCGG CGGCATGTGG TCGCTGACCC TGACCGACAT CGTGCAGTTC
CTGATCATGA CCGTTGGCCT GGTGTTCCTG CTGATGCCGC TGTCGATCAA CGACGCCGGC
GGCTGGGACG CCCTGGTGGC CAAGCTGCCG GCCAGCTACT TCGACTTCAC CGCGATCGGC
TGGGACACCA TCGTCACCTA CTTCCTGATC TACTTCTTCG GCATCTTCAT CGGCCAGGAC
ATCTGGCAGC GGGTGTTCAC CGCCCGCAGC GAGACCGTGG CCAAGGTCGC CGGCTCCGCC
GCCGGTATCT ACTGCGTGCT CTACGGCATG GCCGGGGCGC TGATCGGGAT GGCCGCCAAG
GTCCTGCTGC CGGACCTGGA GAACGTCAAC AACGCCTTCG CCAGCGTGGT CGAGCACAGC
CTGCCGAACG GCATCCGCGG CCTGGTCATC GCCGCCGCCC TGGCGGCGCT GATGTCCACC
GCCAGCGCCG GCCTGCTGGC GGCGTCCACC ACCGTCACCC AGGACCTGCT GCCGCGCCTG
CGCCGCGGCC GCGGCCAGTC CGACAACGGC GACGTGCACG AGAACCGCAT CGCCACCCTG
CTGCTGGGCC TGGTAGTGCT CGGCATCGCC CTGGTGGTCA GCGACGTGAT CAGCGCCCTG
ACCGTGGCCT ACAACCTGCT GGTAGGCGGC ATGCTGATCC CGCTGATCGG CGCGATCTAC
TGGAAGCGCG CCAGCACCGC CGGCGCCATC ACCAGCATGA CCCTGGGCTT CCTTACCGTG
CTGGTGTTCA TGATCAAGGA CGGCCTCGAC GCCAATACGC CGATCTACTA CAGCCTGGCG
GTCGGCCTGC TCAGCTTCGT CCTGGTCAGC CTGTTCTCGC GGCGCCCGAC GGGTGTCGCC
AGCGCCGCCT GA
 
Protein sequence
MALDIFVVLI YAAGMIALGW YGMRRAKTRD DYLVAGRNLG PGFYLGTMAA TVLGGASTIG 
TVRLGYVHGI SGFWLCGAIG LGIVGLSLFL AKPLLKLKIY TVTQVLERRY NPAARHASAL
IMLVYALMIG ATSTIAIGTV MQVLFGLPFW VSILIGGGVV VLYSTIGGMW SLTLTDIVQF
LIMTVGLVFL LMPLSINDAG GWDALVAKLP ASYFDFTAIG WDTIVTYFLI YFFGIFIGQD
IWQRVFTARS ETVAKVAGSA AGIYCVLYGM AGALIGMAAK VLLPDLENVN NAFASVVEHS
LPNGIRGLVI AAALAALMST ASAGLLAAST TVTQDLLPRL RRGRGQSDNG DVHENRIATL
LLGLVVLGIA LVVSDVISAL TVAYNLLVGG MLIPLIGAIY WKRASTAGAI TSMTLGFLTV
LVFMIKDGLD ANTPIYYSLA VGLLSFVLVS LFSRRPTGVA SAA