| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_45890 |
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| Symbol | |
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| ID | 4382870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4077152 |
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| End bp | 4080262 |
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| Gene Length | 3111 bp |
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| Protein Length | 1036 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639326251 |
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| Product | putative RND efflux transporter |
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| Protein accession | YP_791816 |
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| Protein GI | 116049381 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.961343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCCGC GCGCCGGGAT TTCCGGCTGG TGCGTACGGC ACCCGATCGC CACCGCGCTG
CTGACCCTGG CCTCGCTGCT GCTGGGGCTG CTGGCGTTCC TCCGGCTCGG CGTGGCGCCG
TTGCCGGAGG CGGACTTCCC GACCATCCAG ATCAACGCCT TGCTGCCCGG CGGTAGCCCG
GAAACCATGG CCTCGTCGGT GGCCACCCCC TTGGAAGTGC AGTTCAGCGC GATTCCCGGG
ATCACCGAGA TGACCTCCAG CAGCGCCCTG GGCACTACCA CCCTGACCCT GCAGTTCAGC
CTCGACAAGA GCATCGACGT CGCCGCCCAG GAAGTCCAGG CGGCGATCAA CGCCGCGGCC
GGGCGGCTGC CGGTGGACAT GCCGAACCTG CCGACCTGGC GCAAGGTCAA CCCGGCGGAC
AGCCCGATCA TGATCCTGCG GGTCAACTCG GAGATGATGC CGCTGATCGA ACTCAGCGAT
TACGCCGAGA CCATCCTCGC CCGCCAGCTC AGCCAGGTGA ACGGCGTGGG GCAGATCTTC
GTGGTCGGCC AGCAGCGCCC GGCGATCCGC ATCCAGGCCC AGCCGGAGAA GCTCGCCGCC
TACCAGCTGA CCCTGGCCGA CCTGCGCCAG TCGTTGCAGT CGGCCAGCGT CAACCTGGCC
AAGGGTGCGC TCTACGGCGA GGGGCGGGTG TCGACCCTCG CGGCCAACGA CCAGTTGTTC
AACGCCAGCG ACTATGACGA CCTGGTGGTC GCCTACCGCC AGGGCGCGCC GGTGTTCCTC
AAGGACGTGG CGCGGATCGT CTCGGCGCCC GAGGACGACT ACGTGCAGGC CTGGCCGAAC
GGGGTGCCCG GGGTGGCGCT GGTGATCCTG CGCCAGCCTG GGGCGAACAT CGTCGATACC
GCCGACGCGA TCCAGGCCGC GCTGCCACGC CTGCGCGAGA TGCTCCCGGC GACCATCGAG
GTAGACGTGC TCAACGACCG CACCCGGACC ATCCGCTCGT CGTTGCACGA GGTCGAACTG
ACCCTGCTGC TGACCATTGG CCTGGTGGTG CTGGTGATGG GCCTGTTCCT CCGCCAGCTG
TCGGCGACCC TGATCGTCGC TACGGTGCTG GCGGTGTCCC TGAGCGCCAG CTTCGCGGCG
ATGTACGTGC TCGGCTTCAC CCTCAACAAC CTGACCCTGG TGGCGCTGAT CATCGCCGTC
GGCTTCATCG TCGACGACGC CATCGTGGTC GTGGAGAACA TCCACCGACA CCTGGAAGCG
GGCGCCTCGA AGGTCGAGGC GGCGCTCAAG GGCGCGGCGG AGATCGGCTT TACCGTGATT
TCCATCAGCT TCTCGCTGAT CGCCGCGTTC ATTCCCCTGC TGTTCATGGG CGGGATCGTC
GGCCGGCTGT TCCGCGAATT CGCGGTCAGC GTGACGGTGG CGATCCTGAT CTCGGTGGTC
GCTTCGCTGA CCCTGGCGCC GATGCTGGCT TCGCGCTTCA TGCCGGCATT GCGGCATGCC
GAAGCGCCGA GAAAGGGCTT CGCCGAATGG CTGACCGGCG GCTACGAACG CGGCCTGCGC
TGGGCGCTCG GGCACCAGCG GCTGATGCTG GTCGGCTTCG CCTTTACCGT GCTGGTGGCG
GTGGCCGGCT ACGTCGGGAT TCCCAAGGGT TTCTTCCCCT TGCAGGACAC CGCCTTCGTC
TTCGGCACGA GCCAGGCTGC CGAGGATATC TCCTACGACG ACATGGTCGC CAAGCACCGG
CAACTGGCCG AGATCATCGC CAGCGACCCG GCGGTGCAGA GCTACAACCA TGCGGTGGGC
GTCACCGGCG GTAGCCAGAG CCTGGCCAAC GGGCGTTTCT GGATCGTCCT CAAGGACCGT
GGCGAGCGCG ATGTCTCGGT CGGCGAGTTC ATCGACCGGC TGCGCCCGCA ACTGGCCAAG
GTGCCGGGAA TCATGCTCTA CCTGCGCGCG GCGCAGGACA TCAACCTCAG TTCCGGACCC
TCGCGGACCC AGTACCAGTA CGCCCTGCGC AGCAGCGACA GCACCCAGCT GGCGCTCTGG
GCGCAACGCC TCACCGAGCG CCTGAAGCAG GTGCCGGGGC TGATGGATGT GTCCAACGAC
CTGCAGGTCG GCGCCAGCGT CACCGCGCTG GACATCGACC GGGTGGCCGC GGCGCGTTTC
GGCCTCAGCG CCGAGGATGT CAGCCAGACC CTCTACGACG CCTTCGGCCA GCGCCAGGTC
GGCGAGTACC AGACCGAGGT CAACCAGTAC AAGGTGGTCC TCGAACTCGA TGCGCGCCAG
CGCGGCCGCG CGGAAAGCCT GGACTGGTTC TACCTGCGCT CGCCGCTGAG CGGCGAGATG
GTCCCGCTGT CGGCCATCGC CAAGGTCGCG GCGCCGCGCT CCGGGCCGCT GCAGATCAAC
CACAACGGCA TGTTCCCGGC GGTCAACCTG TCCTTCAACC TGGCTGCCGG GGTGTCTCTC
GGCGAGGCGG TGCAGGCGGT GCAGCGCGCC CAGGAGGAGA TCGGCATGCC CTCGACCATT
ATCGGCGTGT TCCAGGGCGC GGCGCAGGCC TTCCAGAGTT CGCTGGCCTC GCAACCGCTG
CTGATCCTCG CCGCGCTGAT TGCGGTGTAC ATCATCCTCG GCGTGCTCTA CGAGAGTTTC
GTGCATCCGC TGACGATCCT TTCGACCCTG CCCTCGGCGG GGATCGGCGC GGTGTTCCTG
CTCTGGGCCT GGGGCCAGGA CTTCTCGATC ATGGCGCTGA TCGGCATCGT GCTGCTGATC
GGTATCGTCA AGAAGAACGG CATCCTCATG GTCGACTTCG CCATCGTCGC CCAGCGCGAG
CAGGGCATGA GCGCGGAGCA GGCGATCTAC CAGGCCTGCC TGACCCGTTT CCGGCCGATC
ATGATGACCA CCCTGGCCGC GCTGCTGGGC GCGATACCCC TGATGATCGG CTTCGGCACC
GGTTCCGAGC TGCGCCAGCC TCTGGGCATC GCGGTGGTCG GCGGGCTGCT GGTGAGCCAG
GTGCTGACCC TGTTCAGCAC GCCGGTGGTA TACCTGGCCC TGGAGCGGCT GTTCCACCGG
CGCGGGGCGA CGACCTCGGA CGGCGGAACC GCTGGGGCGA CGGCGACATG A
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| Protein sequence | MTPRAGISGW CVRHPIATAL LTLASLLLGL LAFLRLGVAP LPEADFPTIQ INALLPGGSP
ETMASSVATP LEVQFSAIPG ITEMTSSSAL GTTTLTLQFS LDKSIDVAAQ EVQAAINAAA
GRLPVDMPNL PTWRKVNPAD SPIMILRVNS EMMPLIELSD YAETILARQL SQVNGVGQIF
VVGQQRPAIR IQAQPEKLAA YQLTLADLRQ SLQSASVNLA KGALYGEGRV STLAANDQLF
NASDYDDLVV AYRQGAPVFL KDVARIVSAP EDDYVQAWPN GVPGVALVIL RQPGANIVDT
ADAIQAALPR LREMLPATIE VDVLNDRTRT IRSSLHEVEL TLLLTIGLVV LVMGLFLRQL
SATLIVATVL AVSLSASFAA MYVLGFTLNN LTLVALIIAV GFIVDDAIVV VENIHRHLEA
GASKVEAALK GAAEIGFTVI SISFSLIAAF IPLLFMGGIV GRLFREFAVS VTVAILISVV
ASLTLAPMLA SRFMPALRHA EAPRKGFAEW LTGGYERGLR WALGHQRLML VGFAFTVLVA
VAGYVGIPKG FFPLQDTAFV FGTSQAAEDI SYDDMVAKHR QLAEIIASDP AVQSYNHAVG
VTGGSQSLAN GRFWIVLKDR GERDVSVGEF IDRLRPQLAK VPGIMLYLRA AQDINLSSGP
SRTQYQYALR SSDSTQLALW AQRLTERLKQ VPGLMDVSND LQVGASVTAL DIDRVAAARF
GLSAEDVSQT LYDAFGQRQV GEYQTEVNQY KVVLELDARQ RGRAESLDWF YLRSPLSGEM
VPLSAIAKVA APRSGPLQIN HNGMFPAVNL SFNLAAGVSL GEAVQAVQRA QEEIGMPSTI
IGVFQGAAQA FQSSLASQPL LILAALIAVY IILGVLYESF VHPLTILSTL PSAGIGAVFL
LWAWGQDFSI MALIGIVLLI GIVKKNGILM VDFAIVAQRE QGMSAEQAIY QACLTRFRPI
MMTTLAALLG AIPLMIGFGT GSELRQPLGI AVVGGLLVSQ VLTLFSTPVV YLALERLFHR
RGATTSDGGT AGATAT
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