| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_45310 |
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| Symbol | ccmF |
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| ID | 4382835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 4037754 |
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| End bp | 4039727 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639326209 |
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| Product | cytochrome C-type biogenesis protein CcmF |
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| Protein accession | YP_791774 |
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| Protein GI | 116049423 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCCG AACTCGGCCA CCTGGCCCTG ATCCTCGCCC TTTGCCTGGC CCTGGTGCAG
TCGAGCCTGC CGCTGGTCGG CGCCTGGCGC GGCGACCGCC AGTGGATGAG CCTGGCGCGC
CCAGCGGCCT GGGGGCAGTT CGCCTTCCTC GCCTTCGCCT TCGGCTGCCT GACCTGGGCC
TTCCTGCGCG ACGACTTCTC GGTGGCCTAC GTGGCCGGCA ACTCCAACAG CGCGCTGCCC
TGGTACTACA AGTTCAGCGC CGTCTGGGGC GCCCACGAAG GTTCGCTGCT GCTCTGGGCG
TTGATCCTCG GCGGCTGGAC CTTCGCCGTG TCGATCTTCT CCCGGCAACT GCCGGAGGTC
ATGCTGGCCC GCGTGCTGGC GGTGATGGGC ATGATCAGCA CCGGCTTCCT GCTGTTCCTG
ATCATCACCT CCAACCCGTT CAGCCGCCTG CTGCCGCAGA CCCCGATGGA CGGCAACGAC
CTCAACCCGC TGCTGCAGGA CGTCGGCCTG ATCGTCCACC CGCCGATGCT CTACATGGGG
TACGTCGGAT TCTCGGTGGC CTTCGCCTTC GCCATCGCCG CACTGCTCGG CGGCCGCCTG
GACGCCGCCT GGGCGCGCTG GTCGCGGCCC TGGACCCTGG TGGCCTGGGC CTTCCTCGGT
ATCGGCATCG TGCTTGGCTC CTGGTGGGCC TACTACGAGC TGGGCTGGGG TGGCTGGTGG
TTCTGGGACC CGGTGGAAAA CGCCTCCTTC ATGCCCTGGC TGGTCGGCAC TGCACTGATC
CACTCGCTGG CGGTGACCGA GAAGCGCGGC GTGTTCAAGA GCTGGACCGT GCTGCTGGCG
ATCGCCGCTT TCTCCCTGAG CCTGCTGGGC ACCTTCCTGG TCCGCTCCGG CGTGCTCACC
TCGGTGCACG CCTTCGCCTC CGACCCGGAG CGCGGGGTGT TCATCCTCGC CTTCCTGCTG
CTGGTGGTCG GCGGCTCGCT GACCCTGTTC GCCCTGCGCG CGCCGGTGGT CAAGAGCCAG
GTCGGCTTCG CCCTGTGGTC GCGCGAGACC CTGCTGCTGC TGAACAACCT GGTGCTGGTG
GTGGCGGCCT CGATGATCCT CCTCGGGACT CTCTACCCGC TGCTGCTCGA TGCCCTCAGC
GGCGCCAAGC TGTCGGTCGG CCCGCCGTAC TTCAACGCCA TGTTCCTGCC GCTGATGGCG
GCGCTGATGG CGGCCCTGGC GGTCGGCGTG CTGGTGCGCT GGAAGGACAC CCCGAGCCGC
TGGCTGCTCG GCATGCTGAC CCCGGTGCTG GTGGCCAGCG CGGTCCTGGC GGCGGCCGGT
TCGATGTACT TCGGCGATTT CAACTGGGCG GTGCTGGCGG TGTTCCTGCT GTCCGCCTGG
GTGGTCCTGG CCGGTTTCCG CGACTTCCTC GACAAGACCC GGCACAAGGG CGTGCTGGCC
GGCGCCCGCA GCCTGACGCG CAGCTACTGG GGCATGCAAC TGGCGCACCT GGGCATCGCC
GTGTGCGCCA TCGGCATCGT CCTCAGCAGC CAGTACAGCG CCCAGCGTGA CCTGCGCATG
TCGCCCGGCG ACACCGTCGA ACTGGGCGGC TACCACTTCC TCTTCGACGG CGCGAAGCAC
CACGAAGGGC CGAACTACAC CTCGGACAAG GGCAGCATCC ACGTCAGCCG CGACGGCAAG
GAGATCGCCA CCCTGCATCC GGAGAAGCGC CTGTACACCG TGCAGAGTTC GATGATGACC
GAGGCCGGGA TCGATGCCGG CTTTACCCGC GACCTCTACG TGGCGCTCGG CGAGCCGCTG
GAGAACGGTG CCTGGGCGGT GCGCGTGCAC GTCAAGCCGT TCGTCCGCTG GATCTGGTTC
GGTGGCCTGC TGATGGGCCT CGGCGGCGCC CTGGCGGCGC TCGACCGGCG CTACCGGGTG
AAGGTGAAAA CACGTGTGCG CGAGGCCCTG GGCCTCGCCG GTCAGGGAGC CTGA
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| Protein sequence | MIPELGHLAL ILALCLALVQ SSLPLVGAWR GDRQWMSLAR PAAWGQFAFL AFAFGCLTWA
FLRDDFSVAY VAGNSNSALP WYYKFSAVWG AHEGSLLLWA LILGGWTFAV SIFSRQLPEV
MLARVLAVMG MISTGFLLFL IITSNPFSRL LPQTPMDGND LNPLLQDVGL IVHPPMLYMG
YVGFSVAFAF AIAALLGGRL DAAWARWSRP WTLVAWAFLG IGIVLGSWWA YYELGWGGWW
FWDPVENASF MPWLVGTALI HSLAVTEKRG VFKSWTVLLA IAAFSLSLLG TFLVRSGVLT
SVHAFASDPE RGVFILAFLL LVVGGSLTLF ALRAPVVKSQ VGFALWSRET LLLLNNLVLV
VAASMILLGT LYPLLLDALS GAKLSVGPPY FNAMFLPLMA ALMAALAVGV LVRWKDTPSR
WLLGMLTPVL VASAVLAAAG SMYFGDFNWA VLAVFLLSAW VVLAGFRDFL DKTRHKGVLA
GARSLTRSYW GMQLAHLGIA VCAIGIVLSS QYSAQRDLRM SPGDTVELGG YHFLFDGAKH
HEGPNYTSDK GSIHVSRDGK EIATLHPEKR LYTVQSSMMT EAGIDAGFTR DLYVALGEPL
ENGAWAVRVH VKPFVRWIWF GGLLMGLGGA LAALDRRYRV KVKTRVREAL GLAGQGA
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