Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_44920 |
Symbol | |
ID | 4384706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4005020 |
End bp | 4006162 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639326179 |
Product | hypothetical protein |
Protein accession | YP_791744 |
Protein GI | 116049453 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00121622 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCATC CCCGTCGGTT GCTTGCTGTA CTTGGGTTGG TGGTCTTGAC CAGCATGACC AGTTGCACTT CGTTTTCTTC TTCTCGGAGC TCTTCCATGG ACAAGACCGG ATGGATCACT CATTGCTTTG GTCGCTTTCT GATTGATCTG CCACCTGACG CGGTAGTCAA TGCCGGATAC TACCTATGGG GAGACAGAAT TGAGTACTTA GATGATAAAC CTACCGAACT GGCAGCCAGG GTTGATCGTC TTGAAAAAGA GTGGAGGACT CAGAAGCATA AATCCAAAGG TAACATGTTT CTTCGTAAAA TTGACTTTGG CAATGAATCA GTAGGTTTAT TGTCTTGGTC TTCAGAGGTT GCCTCTAAAA CCTATTTATT GGATACCTAT GTTACATCTA AGCCTACGTG GCATGCCTAT CGTTGGAAAG GGAAAGTTTC GGTAGACAGA GAGCAACGTG CTGTAGAGAT GTCTAGGACT TTAGCTCGAA ATCTACGCTC GCGCGCGCCC AAAGAAATCC CCAGCGGGCC GGGCTTTTGC ATCGACCAAG CTTATATTGC AGGGGATAAT TTTCAAGATG AAGAGTTTGG GGTTGGCGTT ACGTTCCCCA ACCACCCCGG CGTAGACTTC GAGTTTCGTT CCTTAACGGG GGCTGCGCAA AAAAACCTGC TTGAGCGCGT TGGTGGCCTC ATGCAGGAAT TGCTCTCCAC GTTTGCAGGT ATGGAAACAT TAAGAAAAGG AAAGCATCCT GTCGGGAGCC TTCCCGGAGA GGAGTATCTG GTTGCGGGAA GCGATAAGGG GCAGCGCGGC TATACCTTCA TGTGGGAGGT TCAAGGCAAG GAGGAATCGC TAACCGAGCC CAATCTTACT GCGGGACTGG CGGTACTGGA ACGCAGCAAT GAAAACGGTA AACCACCGCC CCCTGCCTTC AAATCGGACA AAGAGGCTTT GGAACTGTGG GACGCCATTG TCGATTCGAT CCGCGTGCGC CCGACGTATT CATCGCCGCG TGGCGGAAAT GCCGGTCCTT CCCCTGCTCC GACACCTGCT ACGCCTGGCG GCCAAACGCT CGGTGATGAC TATGTCTACG AGGAATTCCT CTCCAGCCTG AAGCCGAAAG ACAGCTGGCT GGACGACCTA TAG
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Protein sequence | MMHPRRLLAV LGLVVLTSMT SCTSFSSSRS SSMDKTGWIT HCFGRFLIDL PPDAVVNAGY YLWGDRIEYL DDKPTELAAR VDRLEKEWRT QKHKSKGNMF LRKIDFGNES VGLLSWSSEV ASKTYLLDTY VTSKPTWHAY RWKGKVSVDR EQRAVEMSRT LARNLRSRAP KEIPSGPGFC IDQAYIAGDN FQDEEFGVGV TFPNHPGVDF EFRSLTGAAQ KNLLERVGGL MQELLSTFAG METLRKGKHP VGSLPGEEYL VAGSDKGQRG YTFMWEVQGK EESLTEPNLT AGLAVLERSN ENGKPPPPAF KSDKEALELW DAIVDSIRVR PTYSSPRGGN AGPSPAPTPA TPGGQTLGDD YVYEEFLSSL KPKDSWLDDL
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