| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_44910 |
|---|
| Symbol | |
|---|
| ID | 4384707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 4003314 |
|---|
| End bp | 4005023 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 639326178 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_791743 |
|---|
| Protein GI | 116049454 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00907398 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.870076 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGCG AACCGCTCGA GCCGAATCAG GATGTGATCA TCCCTCGCTC TCGCGACAGT
CTGGGACGGC CTGTCTACAA GGCTCAGTTG ACCCGTACCG ACAACCAGAG CGAAAAGGTG
GCACTGGTTC GGCAGACCGC TCCCCTGCCG GTGATCTTCA TTCCGGGGAT CATGGGAACC
AACCTGCGCA ACAAGGCAGA CAAGAGCAAG GTCTGGAGGC CGCCGAACGG TCTCTGGCCC
ATGGATGACC TGTTTGCCTC AATCGGTGCG TTATGGACCT GGTATTGGCG AGATGCAAAG
GCTCGTCAAA GATTGCTGAA AGCGGAGAGA GTGGAAGTCG ATGACCAGGG TACGATCGAT
GTCGGTCAAT CTGGTTTGTC CGAAGAAGCT GCCCGCCTGC GCGGCTGGGG CAAGGTCATG
CGCAGTGCGT ATAACCCGGT CATGGGTTTA ATGGAGAGGC GACTGGATAA CATCGTCAGC
CGCCGGGAAC TCCAGGCATG GTGGAATGAC GAAGCCCTCT CTCCTCCTGG AGATCAGGGT
GAGGAGCAGG GAAAAGTTGC GCCGATCGAT GAAGAGGAAT TGCTCAAGGC CAGCCGATAC
CAGTTCGATG TCTGGTGCGC CGGTTATAAC TGGCTACAGT CCAACCGGCA ATCGGCGCTG
GATGTACGCG ACTACATCGA GAACACGGTG TTGCCTTTCT ACCAGAAGGA GTATGGTCTC
GATCCCGGGC AAGTGAGTCG TATGAAAGTC ATTCTGGTCA CCCACTCGAT GGGAGGGCTG
GTGGCGCGGG CCTTGACGCA GTTGCACGGC TATGAGCGCG TATTGGGGGT GGTACATGGC
GTACAACCTG CGACGGGTTC CTCAACCATC TACCATCATA TGCGCTGTGG CTATGAAGGT
ATCGCACAGG TCGTGCTGGG ACGAAATGCC GGTGAAGTGA CAGCCGTTGT CGCCAATTCG
GCCGGCGCGC TGGAGTTGGC CCCTAGCGCC GAATACCGGG AAGGACGTCC CTGGCTGTTT
CTGTGCGACG CGCAGGGGCA GGTGCTCAAG GATATCGATG GAAAGCCTCG GGCTTATCCG
CAGAATCAGG ACCCTTATGA AGAGATATAC AAGAGCTCTA CGTGGTATGG ATTGGTGCCT
GAGCAAAATG CACAATATCT GGACATGTCA GACAAAAAAG AAAGTTTAAG AGTTGGCCCC
CGTGATAACT TTGAAGACTT GATAGATAGC ATTGCTAAGT TTCATGGTGA ATTGTCAGCA
GCAGGCTATC ACTCAGAGAC CTATGCCCAT TACGGAGCTG ACGATAGCCG CCATAGTTGG
CGCGACCTGA TCTGGAAGGG TGACCCTACC CCTCTGGAGA CCCCTGGTGC CACACTCAAC
GACGATGAGA ACGGCACTTA CAACAGTTGG TTCCGCCGGG GCTTGCCCAC CATAGTGCAG
GGTCCGCTGG AGACGGGAAA TCCTCTGGAC GCTTCCGGTA GCGGAGGTGA CGAAACGGTA
CCGACCGACT CCGGCCAGGC GCCTGCCCTG GCGGGCGTCA AGGCCAGCTT TCGGCATGGC
AGCAAGGGCA AGGGACAGGC CAATACAAAA CGGGGCTATG AGCACCAGGA GAGTTACAAC
GATGCTCGTG CTCAATGGGC AGCGCTATAT GGGGTGATCA AAATCACCCA GTTGGCGGAT
TGGCATCCTA ATGACAAAGG AGGGACATGA
|
|---|
| Protein sequence | MSSEPLEPNQ DVIIPRSRDS LGRPVYKAQL TRTDNQSEKV ALVRQTAPLP VIFIPGIMGT
NLRNKADKSK VWRPPNGLWP MDDLFASIGA LWTWYWRDAK ARQRLLKAER VEVDDQGTID
VGQSGLSEEA ARLRGWGKVM RSAYNPVMGL MERRLDNIVS RRELQAWWND EALSPPGDQG
EEQGKVAPID EEELLKASRY QFDVWCAGYN WLQSNRQSAL DVRDYIENTV LPFYQKEYGL
DPGQVSRMKV ILVTHSMGGL VARALTQLHG YERVLGVVHG VQPATGSSTI YHHMRCGYEG
IAQVVLGRNA GEVTAVVANS AGALELAPSA EYREGRPWLF LCDAQGQVLK DIDGKPRAYP
QNQDPYEEIY KSSTWYGLVP EQNAQYLDMS DKKESLRVGP RDNFEDLIDS IAKFHGELSA
AGYHSETYAH YGADDSRHSW RDLIWKGDPT PLETPGATLN DDENGTYNSW FRRGLPTIVQ
GPLETGNPLD ASGSGGDETV PTDSGQAPAL AGVKASFRHG SKGKGQANTK RGYEHQESYN
DARAQWAALY GVIKITQLAD WHPNDKGGT
|
|---|
| |