Gene PA14_44880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_44880 
Symbol 
ID4384710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3998194 
End bp3999471 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content65% 
IMG OID639326175 
Producthypothetical protein 
Protein accessionYP_791740 
Protein GI116049457 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.798821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.217943 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGCAC ATCTCATCGA ATGGCTGAAC CTGCTGGTGC GCTGGATTCA CATGATCGTC 
GGGATCGCGT GGATCGGCGC TTCGTTCTAT TTCGTCTGGC TGGAGAACAA CCTCAACCGC
AGCAACCCGC GTGAAGGCCT GTCCGGAGAC CTCTGGGCAA TCCACGGTGG CGGCATCTAC
CACCTGGAGA AGTACAAGCT GGCTCCGCCG AAAATGCCGG AGAACCTGCA CTGGTTCAAA
TGGGAGGCCT ACTCCACCTG GATGTCCGGG GTGGTGTTGC TGACCATCGT GTTCTACCTG
AACCCGACCC TCTACCTGAT CGCCCCCGGC AGCGACCTGG CGCCGGCGGC GGCCATCGCC
ATCGGTATCG GTTCGCTGGT CTGCGGCTGG TTCGTCTACA CCATCCTCTG CGATTCGGCG
CTGGGCAAGA CCCCTGCCCT GCTCGGCCTG GTCCTGTTCG TCCTGCTGGT CGCCGCCGCC
TACGGCCTGA CCCAGGTGTT CAGCGGCCGC GGCGCCTACC TGCACGTCGG CGCGATCATC
GGCACCATCA TGGTCGGCAA CGTGTTCAGG GTGATCATGC CGGCCCAGCG CGCGCTGGTG
AAAGCCATCG AAGAAAACCG CGAGCCCGAT CCGGTGCTGC CGGCCAAGGG CCTGCTGCGC
TCCCGGCACA ACAACTACTT CACCCTGCCG GTACTGTTCA TCATGATCAG CAACCACTTC
CCGAGCACCT ACGGCAGCCA GTACAACTGG CTGATCCTGG CCGCCATCGC GGTGCTCGCG
GTACTGGTAC GCCACTACTT CAACACCCGC CACGAAAGCA ACCGCTTCGC CTGGGCCCTG
CCCGCCGGCG CGCTGGGCAT GATCGCCCTG GCCTTCGTCA CCACGCCGAA CTACCAGCAG
GCTTCCGCAC CGCTGGCCAG CACCCCGGCG GCGGCACCGG CACAACCGGC GACCGGCGGC
GACGCACCAG CCGCGCCCGC CGCGACCCAG GCCTCCAATG CCGGGGCCGC GAGCGGAGCC
GACTTCGACA AGGTCCATCA CGTGATCCAG GAGCGCTGCA CCGTCTGCCA CTCGGCGAAA
CCGACCAGCC AGCTGTTCAG CACCGCGCCA GGCGGGATCA TGCTCGACAC CCCGCAGCAG
ATCCAGCAAC TGGCACCGAA GATCCAGGCC CAGGCCGTGG CCTCGCAGAT CATGCCGCTG
GGCAACATCA CGCAGATGAC CCAGGAAGAA CGCAACCTGA TCGGCAGCTG GATCGCCAAG
GGCGCACAGA TCAACTGA
 
Protein sequence
MEAHLIEWLN LLVRWIHMIV GIAWIGASFY FVWLENNLNR SNPREGLSGD LWAIHGGGIY 
HLEKYKLAPP KMPENLHWFK WEAYSTWMSG VVLLTIVFYL NPTLYLIAPG SDLAPAAAIA
IGIGSLVCGW FVYTILCDSA LGKTPALLGL VLFVLLVAAA YGLTQVFSGR GAYLHVGAII
GTIMVGNVFR VIMPAQRALV KAIEENREPD PVLPAKGLLR SRHNNYFTLP VLFIMISNHF
PSTYGSQYNW LILAAIAVLA VLVRHYFNTR HESNRFAWAL PAGALGMIAL AFVTTPNYQQ
ASAPLASTPA AAPAQPATGG DAPAAPAATQ ASNAGAASGA DFDKVHHVIQ ERCTVCHSAK
PTSQLFSTAP GGIMLDTPQQ IQQLAPKIQA QAVASQIMPL GNITQMTQEE RNLIGSWIAK
GAQIN