Gene PA14_44780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_44780 
Symbol 
ID4384717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3991629 
End bp3992408 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content67% 
IMG OID639326168 
Productputative transcriptional regulator 
Protein accessionYP_791733 
Protein GI116049464 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.13802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.152718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC AGTTGCAACA CATCAGGAAG CCGCCGCGCA CCGGCAAGGC TGCCCGCAGC 
GGTACCCAGG ACGAGATCGT CTACGCCCAC ATCTTCGACG CCATCCTCGA ACAACGCCTG
GCCCCCGGCA CTAAGCTGAG CGAGGAAGCG CTCGGCGAGA TATTCGGCGT CAGCCGCACC
ATCATTCGCC GCGCCCTCTC GCGCCTGGCC CACGAGCAGG TGGTGCTGTT ACGGCCGAAC
CGCGGCGCGG TGGTCGCCAG CCCGAGCATC GACGAGGCCC GGCAGATCCT TTTCGCCCGC
CGCACCGTCG AGCGCGCCAT CACCGAACTG GCCACCGACA ACGCCACCGC CGAGCGCCTG
GCCGAGTTGC GCGAGATGGT GGTGCAGGAA CAATCCAGCT TCGCCCGTGG CGACCGGGGC
GCCGGCATCC GCCTGTCCGG CGAGTTCCAC CTGAAGCTCG CCGAGATGGC GCGCAACGCT
CCTCTGGTGA GTTTCCAGCG CAGCCTGGTG TCGCAGACCT CGCTGATCAT CGCCCAGTAC
GAAAGCGGCG GTCGCTCGCA CTGCTCGTTC GACGAGCACA ACGAGATCCT CGACGCCATC
GAGAAGGGCG ACAAGGAGCG CGCGGTGACC CTGATGATGC ACCACATGGA GCATATCGAC
AGCAAGCTCA ACCTGGAGAG CGACAACGCT TCCGGCGACC TGCACGCGGT GTTCTCGCAC
CTCCTCGGCG GCAAGAAGAA GCCACGCCGG GCCAAGGCCG ACAGCGACTC GGCGGCCTGA
 
Protein sequence
MTDQLQHIRK PPRTGKAARS GTQDEIVYAH IFDAILEQRL APGTKLSEEA LGEIFGVSRT 
IIRRALSRLA HEQVVLLRPN RGAVVASPSI DEARQILFAR RTVERAITEL ATDNATAERL
AELREMVVQE QSSFARGDRG AGIRLSGEFH LKLAEMARNA PLVSFQRSLV SQTSLIIAQY
ESGGRSHCSF DEHNEILDAI EKGDKERAVT LMMHHMEHID SKLNLESDNA SGDLHAVFSH
LLGGKKKPRR AKADSDSAA