| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_44640 |
|---|
| Symbol | |
|---|
| ID | 4382905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3973631 |
|---|
| End bp | 3974497 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639326157 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_791722 |
|---|
| Protein GI | 116049475 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000000281012 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.174562 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGCGC AATTTACCCC TTCTGCGCTC GCTGACTTGG CAAACTGCGT GCTAAGAATT
CCCCTGGCCC TTCAGCAGCC CTCGTCGGTG GCAATGACTC TACCCTCCCT GACTTCGTTC
ATGCCTCATT TCGGCGCACC GGCGCTGCTC CTGCTGCAGT TGCTCGCGGC CCTGCCAGCG
ACGGCCACGG AGAACGACGC GACGCCATTG CGCTTCTCGG TGATGGAAAG CTGGAGCATG
CCGTTGATCC GCCTGGAACG GGGCCAGCCG ATCGACGGCA TCGTCTACGA CATCACCCGC
TCCCTGGCCC GGCAGGTCGG CCGCAAGGCG CTCTACCACC CCTACCCGCG CGGGCGCATC
GAGCAGGCGA TGAACGGCGC TGAAATCGAT GTTCGCTGCT ATATCAGCCC CGCCTGGCTC
AGCCACGACT TCCCCGGCTA TCGCTGGAGC GTCGCGCTGC TGGTGCAACG CGACATCCTG
GTCGCCCGCG AAGGCTTCGC GCCGATTCCC GAGGCGCTGC CGGCCCAGCG TATCGGTACC
GTCCTCGGCT ACAGCTATCC CCGCTTGCAA GCGCTGTTCG ACATCGGCCG GCTACGCCGC
GACGATGCGC GCACCCAGGA CCTGGTGCTG GAAAAGCTGC GCGCCGGCCG CTACCGCTAC
GCGGTCAGCC ATCAACTGTC GCTGCACTGG AGCAACCGCC AGGCGCCGGG GCAGCCGCCA
CTCCAGGAAG CCGCGCAGCT CGAGGAAACG GCAGTGAGCT GCCTGGTGCG GGATTCCGCG
GAGGTTCCGG TGGAAGCGAT ACTGAAGACG TTCGAGGAAA TGAAGCGCAG CGGAGAGATC
GAGGAGATAC TGCAGCGCTA CCGATAA
|
|---|
| Protein sequence | MLAQFTPSAL ADLANCVLRI PLALQQPSSV AMTLPSLTSF MPHFGAPALL LLQLLAALPA
TATENDATPL RFSVMESWSM PLIRLERGQP IDGIVYDITR SLARQVGRKA LYHPYPRGRI
EQAMNGAEID VRCYISPAWL SHDFPGYRWS VALLVQRDIL VAREGFAPIP EALPAQRIGT
VLGYSYPRLQ ALFDIGRLRR DDARTQDLVL EKLRAGRYRY AVSHQLSLHW SNRQAPGQPP
LQEAAQLEET AVSCLVRDSA EVPVEAILKT FEEMKRSGEI EEILQRYR
|
|---|
| |