Gene PA14_43950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_43950 
SymbolsucC 
ID4385825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3912162 
End bp3913328 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content62% 
IMG OID639326098 
Productsuccinyl-CoA synthetase subunit beta 
Protein accessionYP_791663 
Protein GI116049533 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0993593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCC ACGAATATCA GGGTAAGCAG CTGTTCGCTG AATACGGCCT GCCTGTATCC 
AAGGGCTTTG CCGTAGACAC CCCCGAAGAG GCCGCAGAAG CCTGCGACAA GATCGGCGGC
AGCGAGTGGG TCGTCAAAGC TCAGGTGCAC GCCGGCGGCC GCGGTAAAGC GGGCGGTGTG
AAGCTGGTGA AGAGCAAAGA GGACGCCAAG GCGTTCGCCC AGCAGTGGCT GGGCAAGAAC
CTGGTGACCT ACCAGACCGA CGCCAACGGC CAGCCGGTCA GCAAGATCCT GGTGGAGTCC
TGCACCGACA TCGACAAGGA GCTGTACCTC GGCGCCGTCG TCGATCGTTC CAGCCGCCGC
ATCGTGTTCA TGGCTTCCAC CGAAGGTGGC GTGGACATCG AGAAGGTCGC CCACGACACT
CCCGAGAAGA TCCTCAAGGT CACCATCGAC CCGCTGGTCG GCGCGCAGCC GTACCAGGGC
CGCGAGCTGG CCTTCCAACT GGGCCTGAAG GGCGACCAGA TCAAGCAGTT CACCCATATC
TTCGTCGGCC TGGCGAAGCT GTTCCAGGAC TACGACCTGG CCCTGCTGGA AGTGAACCCG
CTGGTGATCA AGAAAGACGG CAACCTGCAC TGCCTGGATG CCAAGATCAA CATCGACAGC
AACGCCCTGT ACCGTCAGCC GAAGCTGCGC GCCATGCACG ACCCGTCCCA GGACGACGCC
CGTGAAGCCC ATGCGCAGAA GTGGGAGCTG AACTACGTCG CGCTGGAAGG CAACATCGGC
TGCATGGTCA ACGGCGCCGG CCTGGCCATG GGTACCATGG ACATCGTCAA CCTGCACGGC
GGCAAGCCGG CCAACTTCCT CGACGTTGGC GGCGGTGCGA CCAAGGAGCG CGTGACCGAA
GCGTTCAAGA TCATCCTGTC CGACAGCAAC GTGAAGGCTG TCCTGGTGAA CATCTTCGGC
GGCATCGTGC GTTGCGACAT GATCGCCGAA GGCATCATCG GCGCCGTCAA AGAAGTCGGC
GTGAAGGTTC CGGTTGTCGT CCGCCTGGAA GGCAACAACG CTGAACTGGG TGCCAAGGTC
CTGGCCGAAA GCGGCCTGAA CATCATCGCG GCAACCAGCC TGACCGACGC TGCCCAGCAA
GTCGTCAAGG CCGCGGAGGG TAAGTAA
 
Protein sequence
MNLHEYQGKQ LFAEYGLPVS KGFAVDTPEE AAEACDKIGG SEWVVKAQVH AGGRGKAGGV 
KLVKSKEDAK AFAQQWLGKN LVTYQTDANG QPVSKILVES CTDIDKELYL GAVVDRSSRR
IVFMASTEGG VDIEKVAHDT PEKILKVTID PLVGAQPYQG RELAFQLGLK GDQIKQFTHI
FVGLAKLFQD YDLALLEVNP LVIKKDGNLH CLDAKINIDS NALYRQPKLR AMHDPSQDDA
REAHAQKWEL NYVALEGNIG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVTE
AFKIILSDSN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GNNAELGAKV
LAESGLNIIA ATSLTDAAQQ VVKAAEGK