Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_43950 |
Symbol | sucC |
ID | 4385825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3912162 |
End bp | 3913328 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639326098 |
Product | succinyl-CoA synthetase subunit beta |
Protein accession | YP_791663 |
Protein GI | 116049533 |
COG category | [C] Energy production and conversion |
COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0993593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTCC ACGAATATCA GGGTAAGCAG CTGTTCGCTG AATACGGCCT GCCTGTATCC AAGGGCTTTG CCGTAGACAC CCCCGAAGAG GCCGCAGAAG CCTGCGACAA GATCGGCGGC AGCGAGTGGG TCGTCAAAGC TCAGGTGCAC GCCGGCGGCC GCGGTAAAGC GGGCGGTGTG AAGCTGGTGA AGAGCAAAGA GGACGCCAAG GCGTTCGCCC AGCAGTGGCT GGGCAAGAAC CTGGTGACCT ACCAGACCGA CGCCAACGGC CAGCCGGTCA GCAAGATCCT GGTGGAGTCC TGCACCGACA TCGACAAGGA GCTGTACCTC GGCGCCGTCG TCGATCGTTC CAGCCGCCGC ATCGTGTTCA TGGCTTCCAC CGAAGGTGGC GTGGACATCG AGAAGGTCGC CCACGACACT CCCGAGAAGA TCCTCAAGGT CACCATCGAC CCGCTGGTCG GCGCGCAGCC GTACCAGGGC CGCGAGCTGG CCTTCCAACT GGGCCTGAAG GGCGACCAGA TCAAGCAGTT CACCCATATC TTCGTCGGCC TGGCGAAGCT GTTCCAGGAC TACGACCTGG CCCTGCTGGA AGTGAACCCG CTGGTGATCA AGAAAGACGG CAACCTGCAC TGCCTGGATG CCAAGATCAA CATCGACAGC AACGCCCTGT ACCGTCAGCC GAAGCTGCGC GCCATGCACG ACCCGTCCCA GGACGACGCC CGTGAAGCCC ATGCGCAGAA GTGGGAGCTG AACTACGTCG CGCTGGAAGG CAACATCGGC TGCATGGTCA ACGGCGCCGG CCTGGCCATG GGTACCATGG ACATCGTCAA CCTGCACGGC GGCAAGCCGG CCAACTTCCT CGACGTTGGC GGCGGTGCGA CCAAGGAGCG CGTGACCGAA GCGTTCAAGA TCATCCTGTC CGACAGCAAC GTGAAGGCTG TCCTGGTGAA CATCTTCGGC GGCATCGTGC GTTGCGACAT GATCGCCGAA GGCATCATCG GCGCCGTCAA AGAAGTCGGC GTGAAGGTTC CGGTTGTCGT CCGCCTGGAA GGCAACAACG CTGAACTGGG TGCCAAGGTC CTGGCCGAAA GCGGCCTGAA CATCATCGCG GCAACCAGCC TGACCGACGC TGCCCAGCAA GTCGTCAAGG CCGCGGAGGG TAAGTAA
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Protein sequence | MNLHEYQGKQ LFAEYGLPVS KGFAVDTPEE AAEACDKIGG SEWVVKAQVH AGGRGKAGGV KLVKSKEDAK AFAQQWLGKN LVTYQTDANG QPVSKILVES CTDIDKELYL GAVVDRSSRR IVFMASTEGG VDIEKVAHDT PEKILKVTID PLVGAQPYQG RELAFQLGLK GDQIKQFTHI FVGLAKLFQD YDLALLEVNP LVIKKDGNLH CLDAKINIDS NALYRQPKLR AMHDPSQDDA REAHAQKWEL NYVALEGNIG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVTE AFKIILSDSN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GNNAELGAKV LAESGLNIIA ATSLTDAAQQ VVKAAEGK
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