| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_43830 |
|---|
| Symbol | panB |
|---|
| ID | 4385835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3902443 |
|---|
| End bp | 3903264 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639326088 |
|---|
| Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| Protein accession | YP_791653 |
|---|
| Protein GI | 116049543 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
|---|
| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 50 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGTC ATCGCCCGCA ACATCGCCTG TCCGTTCCCG ATATCCAGCG CCGCAAGGGT
GCCGGCAGCC TGGTGGCGCT GACCGCCTAC AGCACGCCCA TGGCCCGCCT CCTCGATCCG
CACGCCGACC TGCTGCTGGT CGGCGATTCG CTGGGCATGG TGCTCTATGG CATGCCCAGT
ACCCTGGGAG TGAGCCTGGA GATGATGGTC GCCCACACCC TGGCGGTGAT GCGCGGCAGC
CGGCGCGCCT GCGTGGTGGC CGACTTGCCG TTCGCCAGCT ACCAGGAATC GCCCCGACAG
GCGTTCCGCA ACGCCGCACG CCTGCTGGCC GACAGCGGCG CCCAGGCGGT GAAGCTGGAA
GGCGGTGAGG AAATGGAAGA AACCGTGGAC TTCCTGGTAC GCCGTGGCAT ACCGGTGCTC
GCCCATATCG GCCTGATGCC GCAGCAGGTC AACGCCATGG GCGGCTTCAA GGCCCAGGGG
CGTGACCCGG AAAGCGCCGA ACGGGTACGC CGCGACGGCC TCGCCATGCA GCGCGGCGGC
GCCTTCGCGG TGGTCATCGA AGGCGTAGGC GAGCCGCTGG CCCGTCGCCT TAGCGAAGAA
CTGGCGATCC CCTGCATCGG TATCGGCGCC TCGCCGGCCT GCGACGGCCA GGTACTGGTC
AGCGAGGACC TGCTCGGGCT AAGCGGCGAA CAGGTACCGC GCTTCGTCGA ACGCTACGCG
CGCCTCGACC GGGAAATCGA CGAGGCGGCC CGGCGCTTCG CCGAGGACGT GCGCGAACGG
CGCTTCCCCG AGGCCAGGCA TTGCTTCGCC ATGCGCGAGT GA
|
|---|
| Protein sequence | MSSHRPQHRL SVPDIQRRKG AGSLVALTAY STPMARLLDP HADLLLVGDS LGMVLYGMPS
TLGVSLEMMV AHTLAVMRGS RRACVVADLP FASYQESPRQ AFRNAARLLA DSGAQAVKLE
GGEEMEETVD FLVRRGIPVL AHIGLMPQQV NAMGGFKAQG RDPESAERVR RDGLAMQRGG
AFAVVIEGVG EPLARRLSEE LAIPCIGIGA SPACDGQVLV SEDLLGLSGE QVPRFVERYA
RLDREIDEAA RRFAEDVRER RFPEARHCFA MRE
|
|---|
| |