Gene PA14_43820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_43820 
Symbol 
ID4385836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3901580 
End bp3902362 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID639326087 
Productputative transcriptional regulator 
Protein accessionYP_791652 
Protein GI116049544 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAA CGGGACAAGA ACGCGACCTG CCGCGATTCC GCAGCCTGCC CTGCGCGGTG 
TATCTGCGCG CCTTCGAGAT GCCCGCCGGG CACCGGGTGG AGATGCACGA CCACCCCTGG
GGCCAACTGA TGTACGCCGC CAGCGGCACT TTGCGCGCCA GCACCGAGCG GCACAGCTAT
CTGGTGCCGG CGCAGCGGGC GCTGTGGATT CCGCCGGGCG TCCGGCACGC CGCGGAGGCT
TGCAACCCTG TGCTGTTCCG CAGTCTCTAC CTGGATCGTT CGCTGCCCGG CGGTTGCCGG
GTACTGGAGG TGTCCGGCCT GCTGCGCGAA CTGTTGCTGC GGGCGGCGGA ATTTCCCCGT
GAATATCCGC CGGGTGGCGA GGCCGAGCGT CTCATGCAGG TGGTCGCCGA TGAGGTCGGG
CGCCTTCGCG AGGCGCCGCT GAACCTGCCG TTGCCTGGCG ACCCGCGCTT GCGCCGGATC
ACCGACGCGC TACAGGCGGA TCCCGCCGAT CCGCGCGGCA TCTCGGATTG GGCGGGACTG
GTGGGGGCTT CCCGACGGAC CCTGGCGCGG CTGTTCCGCG AGCAGACCCA GTTGTCGTTT
CGCGAGTGGC GCCAGCGCCT GCGTCTGCTC AACGCGGTCG CCGCGCTGGA GGAGGGCGCC
AGCGTGACGC GGGTGGCCAG CGACCTTGGC TACGACTCCA CCTCGGCGTT CATCAGCCTG
TTCCAGCGTC ATTTCGGCCA GACCCCCGGT TGCTTCGCCC GCTCCCTGCG CTTGCCCAAC
TGA
 
Protein sequence
MPQTGQERDL PRFRSLPCAV YLRAFEMPAG HRVEMHDHPW GQLMYAASGT LRASTERHSY 
LVPAQRALWI PPGVRHAAEA CNPVLFRSLY LDRSLPGGCR VLEVSGLLRE LLLRAAEFPR
EYPPGGEAER LMQVVADEVG RLREAPLNLP LPGDPRLRRI TDALQADPAD PRGISDWAGL
VGASRRTLAR LFREQTQLSF REWRQRLRLL NAVAALEEGA SVTRVASDLG YDSTSAFISL
FQRHFGQTPG CFARSLRLPN