Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_43820 |
Symbol | |
ID | 4385836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3901580 |
End bp | 3902362 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326087 |
Product | putative transcriptional regulator |
Protein accession | YP_791652 |
Protein GI | 116049544 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAAA CGGGACAAGA ACGCGACCTG CCGCGATTCC GCAGCCTGCC CTGCGCGGTG TATCTGCGCG CCTTCGAGAT GCCCGCCGGG CACCGGGTGG AGATGCACGA CCACCCCTGG GGCCAACTGA TGTACGCCGC CAGCGGCACT TTGCGCGCCA GCACCGAGCG GCACAGCTAT CTGGTGCCGG CGCAGCGGGC GCTGTGGATT CCGCCGGGCG TCCGGCACGC CGCGGAGGCT TGCAACCCTG TGCTGTTCCG CAGTCTCTAC CTGGATCGTT CGCTGCCCGG CGGTTGCCGG GTACTGGAGG TGTCCGGCCT GCTGCGCGAA CTGTTGCTGC GGGCGGCGGA ATTTCCCCGT GAATATCCGC CGGGTGGCGA GGCCGAGCGT CTCATGCAGG TGGTCGCCGA TGAGGTCGGG CGCCTTCGCG AGGCGCCGCT GAACCTGCCG TTGCCTGGCG ACCCGCGCTT GCGCCGGATC ACCGACGCGC TACAGGCGGA TCCCGCCGAT CCGCGCGGCA TCTCGGATTG GGCGGGACTG GTGGGGGCTT CCCGACGGAC CCTGGCGCGG CTGTTCCGCG AGCAGACCCA GTTGTCGTTT CGCGAGTGGC GCCAGCGCCT GCGTCTGCTC AACGCGGTCG CCGCGCTGGA GGAGGGCGCC AGCGTGACGC GGGTGGCCAG CGACCTTGGC TACGACTCCA CCTCGGCGTT CATCAGCCTG TTCCAGCGTC ATTTCGGCCA GACCCCCGGT TGCTTCGCCC GCTCCCTGCG CTTGCCCAAC TGA
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Protein sequence | MPQTGQERDL PRFRSLPCAV YLRAFEMPAG HRVEMHDHPW GQLMYAASGT LRASTERHSY LVPAQRALWI PPGVRHAAEA CNPVLFRSLY LDRSLPGGCR VLEVSGLLRE LLLRAAEFPR EYPPGGEAER LMQVVADEVG RLREAPLNLP LPGDPRLRRI TDALQADPAD PRGISDWAGL VGASRRTLAR LFREQTQLSF REWRQRLRLL NAVAALEEGA SVTRVASDLG YDSTSAFISL FQRHFGQTPG CFARSLRLPN
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