| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_43570 |
|---|
| Symbol | |
|---|
| ID | 4381773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3879065 |
|---|
| End bp | 3879706 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639326066 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_791631 |
|---|
| Protein GI | 116049565 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.443465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 65 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAT TGTCTGTCTT GCTGACCCTG GCGGCGGTGT TCGCCGTCGC CCTGGTCAGC
CCCGGTCCCG ATGTCGCCCT GGTGGTGCGC ACGTCCCTGC ACCAGGGGCG GCGGGCCGGC
CTGGCCAGCG CGCTGGGGCT GGCCTGCGGG ATTTTCCTGC ATACCACCCT GGTGCTGACC
GGCGTGTCGC TGCTGCTCAG CCGTACGCCT GTGCTGTTCG CCATCCTGCA GGCGCTCGGC
GCGCTGTACC TGGCCTGGCT CGGCGTCGGC GCGCTGCGCG CCTGGCTGCG GCGCGGCGAC
GGCCAGCCGG GCCGGCTCGA CGGGGCGCTG CCGCCGTCGC CCCTGGGGCC CTGGCTGCGT
GGGGTGGCGA CCAATCTGTT CAATCCCAAG GCGCTGGTGT TCTTCATCGC CTTGCTCGGC
AGCCTGATTC CTGCGCAGAT GTCGCTCGGC GGCAAGCTGG CGGTGGCGGC GCTGCTGTTC
GGCATGGGCG CCTGCTGGTT CGGCCTGCTC AGCCTGACCC TTACCCGCCC GGCCCTGCAG
GCCCGCCTGT TGCGCGCGGT GCCCTGGCTG GACGCGGCCT GCGGGGTGGT GTTCCTGCTG
GTGGCGGCGG CGATCCTCGA GCATCTCGTC CGCTCTGCCT GA
|
|---|
| Protein sequence | MQELSVLLTL AAVFAVALVS PGPDVALVVR TSLHQGRRAG LASALGLACG IFLHTTLVLT
GVSLLLSRTP VLFAILQALG ALYLAWLGVG ALRAWLRRGD GQPGRLDGAL PPSPLGPWLR
GVATNLFNPK ALVFFIALLG SLIPAQMSLG GKLAVAALLF GMGACWFGLL SLTLTRPALQ
ARLLRAVPWL DAACGVVFLL VAAAILEHLV RSA
|
|---|
| |