| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_43160 |
|---|
| Symbol | |
|---|
| ID | 4381804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3844318 |
|---|
| End bp | 3845520 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639326034 |
|---|
| Product | putative transporter |
|---|
| Protein accession | YP_791599 |
|---|
| Protein GI | 116049596 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
|---|
| TIGRFAM ID | [TIGR00843] benzoate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.243206 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAA CCACCCAGCC CCAGCCCCAG CCTCGTCTGC GTCCGTTCGC CGACTCCTCT
CCCGCCGCCG TGGTGGCCGG CTTCGTCGCC ATGCTCACCG GCTACACCAG CTCGCTGGTA
CTGATGTTCC AGGCCGGGCA GAACGCCGGC CTCAGCAGCG CGCAGATTTC CTCGTGGATC
TGGGCCCTGT CGATCGGCAT GGGCCTGGCG ACCATCGGCC TGACCCTGCG CTACCGGGTG
CCGATCGTGA TCGCCTGGTC CACCCCCGGC GCGGCGCTGC TGATCAGCAG CCTGCCCGGA
GTGCCGTACA GCGAGGCGAT CGGCGCCTTC ATCGTCTGCG CCCTCCTGAT CACCCTGTGC
GGCGTCACCG GCAGCTTCGA ACGCCTGATG CGCCAGGTTC CCTCCTCGCT GGCCTCGGCG
CTGCTGGCCG GGGTGCTGTT CCGCATCGGC ATCGAGATCT GCAACGCCGC CGAGCAACAG
ACCCTGCTGG TGCTGGCGAT GTTCTTCAGC TATCTGCTGT GCAAACGCTT CTCGCCGCGC
TATGCGGTGT TCGCTGCGCT ACTGGTGGGG GTGCTGCTGG CCGGGATACT GGGCCAACTG
GACTTCAGCA GGTTCCGCCT GGAACTGGCG GTACCGGAGT GGACCATGCC GAGCTTCTCC
CTGGCCGCCA CCATCAGCAT CGGCATCCCG TTGTTCATCG TCGCCATGGC GTCGCAGAAC
ATGCCCGGCA TCGCCGTGCT GCGCGCCGAC GGCTACCAGG TGCCGGCCTC GCCGCTGATC
TCGAGCACCG GCATCGCCTC GATCCTGCTG GCGCCGTTCG GCTCCCACGG GATCAACCTG
GCGGCGATCA GCGCGGCGAT CTGCACCGGT CCCTCGGCCC ACGAGGACCC GCACAAGCGC
TATACCGCGG CGCTCTGGTG CGGCTTCTTC AACTGCGTCG CGGGAACCTT CGGCGCCACC
CTGGCAGCGT TGTTCGCGGC GTTCCCCAAG GCACTGGTGC TGTCCATCGC CGCTATCGCC
CTGCTCGGCT CGATCATGAA CGGCCTGGCC AATTCGATGG CCGACGAGCG CCAGCGCGAG
GCCGCGCTGG TGACCTTCAT GGTCACCGCC TCCGGCTTCA CCCTGCTGTC CATCGGCTCG
GCGTTCTGGG GCCTGGTGGC CGGCCTGCTG ACTCAGTTCG TGCTCAACTG GCGGCGCGGC
TGA
|
|---|
| Protein sequence | MTETTQPQPQ PRLRPFADSS PAAVVAGFVA MLTGYTSSLV LMFQAGQNAG LSSAQISSWI
WALSIGMGLA TIGLTLRYRV PIVIAWSTPG AALLISSLPG VPYSEAIGAF IVCALLITLC
GVTGSFERLM RQVPSSLASA LLAGVLFRIG IEICNAAEQQ TLLVLAMFFS YLLCKRFSPR
YAVFAALLVG VLLAGILGQL DFSRFRLELA VPEWTMPSFS LAATISIGIP LFIVAMASQN
MPGIAVLRAD GYQVPASPLI SSTGIASILL APFGSHGINL AAISAAICTG PSAHEDPHKR
YTAALWCGFF NCVAGTFGAT LAALFAAFPK ALVLSIAAIA LLGSIMNGLA NSMADERQRE
AALVTFMVTA SGFTLLSIGS AFWGLVAGLL TQFVLNWRRG
|
|---|
| |