| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_43100 |
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| Symbol | |
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| ID | 4381809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3835369 |
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| End bp | 3840213 |
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| Gene Length | 4845 bp |
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| Protein Length | 1614 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639326029 |
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| Product | putative Rhs family protein |
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| Protein accession | YP_791594 |
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| Protein GI | 116049601 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0535223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.616257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGT CGTTCTACGC CATGTTCATG CTGCGCGGAG TGAACGCGAA GCAGCCGGAT
GCCAGCCAGT TGATCGGCGA ATTCAGCTCC GGGGTGCTCA ACCGCTATGA GGAATATGCG
AACAGTTGGC TCTGGGGCTG GGCACTCGAC GTCCAGCAGA CCATCGCCCT TTCCGATGGG
AACGGCAACG AGTTGACCAG GCTGAAAGCC GACAAGGACG CCAACATCCT CGAAGACGTC
GCCTCATGTC CGGTCAACGG TCAACTGAAA CTGCTGCATA CTTTCGAATC GACCAGTTTC
GTGCCCATCG GCAACACGCC TTACGAAATC ACTCGGATAG GCAGCAGGAC ACCGCAGTTC
AAGGGCGTAC TGGATGCAGA TGGGATGGCG AGCATAAGCG GCTGCGCTCC CAATACGCTG
TACCAGGTCA AGTTCTACCC AGAGGTAAGC ATCCAGGAGA TCGACGCGCT CTACCGCTCC
TACGACGACG TAATCGCCAA GCTGAACGAG TGGCTTCTGG AGCAATGGAA CGGCCCGCTT
TCCGCCGAAT GGAAAAGGCT CGCGCCGGTT GGCGACCGTA GGCGGATGGA GCAGATAAAC
GACGCCTATC TGGACGGCAT GGGCAAAGCG CTGGTCAATC TCTGGGATGA TGTGGTCGAG
CTGTTCGGCA TCCTCGCGAA CCTCGACGAG CACGCGGCGA AACTCCTTGA GTTCATCAAC
GAAGCGGATT TCGAAAAGCT CAAGGCTCAG GCCAAGGAAC TCCTCGGTAC CGCCTTGCTG
ATCGCCAGCG ACGAACCGCT TCTGTTCATC TATGCCAGCG CCATCGTGTG CTGGACCCAG
TTGCTGCCGC CCACGACTGC CGCGGAAATG GTCGCGGAAC TCTCCACCGG CCTGCTCCTC
GATATTCTGC TCGGCATCAT CCTGACCGGC GGAGCCGGTC TCGCCGTTCG CCTGGCCGTC
AAGGGCTCGA AAGCAATCAA GGCCTCCGAA GGTGCGATGC TGCTGCGCAA AGCCATGCAG
GTGCTGATCG ATACCAGCTG TCGGCATTCC CTCCAGTTGC ACGCGGAAAA GCTGAAACCT
CTGGCCGTCC GCGGTGAAGT GATGGCCAAC AGCTCCAACA AGATCACCGC ACAGATCCAG
AGCACCGCCC AAGGCATCGC CCGCACCGAG CACGACACCC TGCCGCTGAG CCGAGGAAAG
CGCGCGAACA CCTCGCTCTC CAGCAGTCAG GCGACGCCCG ATGCCTCCGC ACCCGGCAGG
ACGCCCGCCG GCAAACCCGC CGACCAGGCC GCCCAGACCT GCGTCAAGGA CTGTCCCGTT
TCGATGGTCA CCGGCGAGGA GCTGCTGACC CTGACCGACT GCGAGCTGGA CGGTCCGCTG
CGTTTCGCCT GGACGCGCCT GTACCGCACC AGCGCGGCGG AAATCGACAA TGGTCTGGGC
TTCGGCTGGA GCCATGCCCT CTCCCATCGC CTCGATCGCG ACGGCGACGA GCTGGTATGG
ACCGATCACG AGAACCGCCG GACCCGCTTC CCGATCCCTG ACGCCCAGCG CCCGGCGATC
ACCAACCGAC TGTCGCGCGC CGCCATCTAC CTCGGCGGCG ACCCATCCGA ACTGATCCTT
GCCCAGGCCG GCGAAAAGCC GCGCTTCTAC CACTTCCGCA AAGACCCGGA CGGCGCTTAC
CTGATCGCCA TCAGCGACGC CTACGGCAAC CGCCTGGAAC TGAGTCGCGA CCGCCTCGGC
CGGCCGCGCC GCCTCAGCCA CAAGGCCGGG CGCGCGCTAC TGCTGTGCTA CCAGGGCAGG
CACATCGAGC GCGTCGAGTA CCAGGTGTAC CAGCCCGCCG ATAACCTGGA GGCCTGCTGG
CACACCACCC AGGTACTCGC CCGCTACCGC TGCAACGAAC GTGGCCAGTT GATCGAAGCC
GGAAACGCAC TCTACGAGGC CGAACGCTAT CGCTACGACG CGCGCAATGT CATCCTCGAG
CGCCAGTTGG CCGGCGGCGC CTCGTTCTTC TGGGAATGGG AAGGCGAAGG CAAGCAGGCC
CGCGCGGTCC ATCACTGGGC CAGCTTCCCG CAGATGGACT CGCGCTACGT CTGGAACGAA
GACGGCAGCG TTACCGCGAT CAACGCCGAC GGCAGCGAGG AAGTCTATGT CCACGACGAC
AACGCGCGCC TGGTACGCCA GGTCGATCCC GACGGAGGCG AAACCCTCAG GCACTACGAC
GAGAAGGGCC AACTGGTCGC CGAACGCGAT CCGTTGGGAA CGATCACCGA GTACCGCTAC
GACCAGGCCG GACGCTTGGA GGCACTGCTC CCGGCCGAAG GCGAGCCAAC CTGCTATAGC
TACTTCGACG GCTTCGTGCG CAGCGTGCGC CGCGGCGAGG CGCAGTGGAA GTACGAGCGC
AACACTCAGG GCGACATCAC CCGCCAGACC GATCCCGAAG GCAACGTCAC CCACTACGCC
TACGACCACC GCGGCTGCCT GGTGGAAATC ACCCATGCCG ACGGCAGCCT GCACCAGTTG
ACCTGGAATC CGCTCGGCCA GTTGATAGAA GAACAGCTTC CGGACGGTAG CGTGCGCCGC
TATCGCTACG ACACACTGGG TAGACAGATC ACCCGCCAGG ACGAAAGCGG CGCCATCACC
CGGTTCCAGT GGGATGCAGC AGGCCGCCTG AGCCAGATCA CCCTGCCCGG TGGCGCCAGC
CGCATGTACC GCTACAACGC TTACGGCAAG GTCACCAGCG AGTGCGACGA ACAGGGCCGG
ATGACCCGCT ACGAATATCT TGACGACCTG CACCTGGTCA GCCGGCGGAT CAACCCGGAC
GGCAGTCAGC TGCGCTACCG CTACGAAAAC GCCCGGCTAC TGCTCAGCGA GATCGAGAAC
GAACGCGGCG AACGCTATCG CCTCGATTAC CACGGCAACG GCCTGATCAG CCAGGAAACC
GGCTTCGACG GCCGCCGCAC CGCCTATCGC TACGACCTCA AAGGCCAGCT TCTGGAGAAA
ACCGAGTACG GCGACGACGG CAGCGAACTG CGCACCACCT ACCAGCGCGA CAGTACCGGG
CGCCTGCTGG CGAAGACACT GCCCGACGGC AATCGGGTCG ACTACCGCTA CGATACGCTC
GGACGCCTGG TCGCCGTCGA CGACGGCACC TGGCCGCTGG CCTACGAATA CGACCTACGG
GACCGCCTGG TCCGCGAGCA CCAGGGCTGG GCCACCCTTC ACTACGCCTA CGACGCCCTC
GGCCAGTTGA TCCACTGCCG ACTGCCCGAC GGCAACCGCG TCGACTACCG CTACCAGACC
GGCGGCACCC TCTCGGCAAT CGATCTCAAC GGCCAGTCCC TGACCCGGCA CCAGTTCGGT
AGCGGTCGCG AACGCCAGCG CCAGCAGGGC GAACTGCTCA GCCAATACCA CTACGATGAG
CAGGGCCGCC TGCTGGCCCA CCAGGTCAGT CAGCGGCAGC GCCATCTCTA CCAGCGCCAG
TACCGCTATG ACGCTAGCGG CAACCTGGCC GCCATCGAGG ACAGCCGCAA GGGCATTCGC
AGCTTCCACT ACGACCCGCT GGACCGCCTG CTCGGCGTAC GCGGTGAAAC CCCGGAAAGC
TTCGTGCACG ACCCGGCCGG CAACCTGCTC GCCCAGGGCG GGCAATTCGA CGCGCGACAG
ATGGAGGTTC GCGGAAATCG CCTGCTGACG CAGGGCGACC GGCATTTCGA CTACGACGCC
CACGGCAATC TCGTTCGCGA ACGCCGCGGC ACCGGGCAGA AGCTGGTCAC CGAATACAGC
TACGACTGCC AACACCGCCT GATCGGCGTC AGCCTGCCGG ACGGGCGCCA GGTCGTCTAC
CGCTACGACG CCTTCGGCCG ACGCATTGCC AAGCAGGTCG ACGGGCGCAA TACCGAGTTC
CTCTGGCTCG GCGAACGCCT GCTCGCCGAG AGCGGCGACC GGCACTACCG CACCTATCTC
TACGAACCCG ACAGCTTCCG CCCGCTGGCC CTGCTCGACG GCGAAGGCCC GGAACAGGTC
GAACCCTGCT ACTACCAACT CGACCACCTC GGTACCCCGC AGGAACTGAC CCGCGCCGAT
GGCCGCCTCT GCTGGTCGGC GCGCTACCGG GCTTACGGCA ATGTGCTCAA GCTGGACATC
GCCGAAGTGG ATAACCCACT GCGCTTCCAG GGCCAGTATT TCGACGCCGA GACCGGGCTG
CACTACAACC GCCATCGCTA CTACAATCCA AGCACGGGAC GCTACCTGAC CCCCGATCCG
ATCAGGCTGG CAGGTGGGTT GAACAGCTAC CGGTACGTGC CGAATCCGAC GGGGTGGGTG
GACCCGTTGG GGCTGGCCTC AAATAAAACT CGCTGTCCCG AAGCATTAGA CAATAATCCC
CGCAAAGGGA TTAACTCCAC ATCCGGCAGC AAAAAGCCGG CAGGACCAAT CGTAGAGCTG
GATGCGCAGG GAAACGAGAT TTACTACCGA ACACTAAGCG AGCAGCACCT TGAGATACTG
AGGAACAACT TTGAAGTACC TCCGACGAGT GAGACCTTCA TCTCCCCGCT ACAATCCTAC
TCCCAAGAGT ATGATGGGAA ATTAGTAAGA CTTACAGCCA GTCCAGGCAC CATGAATGAG
CTGTCTAAAA TTGGAGTAAC TGCAAATTCC GGAACCGGCC TATTGCTTCC AGATCTCCCT
CCCGCCCGAA AGGGCTGGAA ACAGAACAAC GCACTATTCA AACTCGAAGC ACTAAAAAAG
CCAACGATAA ATGAAGGAGG CGGCGTTATC AACACTGGCC TTGGGGATGG AAAAGCCCTA
GAGATTTTCA ACAAGAACCT AATAGACTTC GAAGTAATAG ACTAG
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| Protein sequence | MISSFYAMFM LRGVNAKQPD ASQLIGEFSS GVLNRYEEYA NSWLWGWALD VQQTIALSDG
NGNELTRLKA DKDANILEDV ASCPVNGQLK LLHTFESTSF VPIGNTPYEI TRIGSRTPQF
KGVLDADGMA SISGCAPNTL YQVKFYPEVS IQEIDALYRS YDDVIAKLNE WLLEQWNGPL
SAEWKRLAPV GDRRRMEQIN DAYLDGMGKA LVNLWDDVVE LFGILANLDE HAAKLLEFIN
EADFEKLKAQ AKELLGTALL IASDEPLLFI YASAIVCWTQ LLPPTTAAEM VAELSTGLLL
DILLGIILTG GAGLAVRLAV KGSKAIKASE GAMLLRKAMQ VLIDTSCRHS LQLHAEKLKP
LAVRGEVMAN SSNKITAQIQ STAQGIARTE HDTLPLSRGK RANTSLSSSQ ATPDASAPGR
TPAGKPADQA AQTCVKDCPV SMVTGEELLT LTDCELDGPL RFAWTRLYRT SAAEIDNGLG
FGWSHALSHR LDRDGDELVW TDHENRRTRF PIPDAQRPAI TNRLSRAAIY LGGDPSELIL
AQAGEKPRFY HFRKDPDGAY LIAISDAYGN RLELSRDRLG RPRRLSHKAG RALLLCYQGR
HIERVEYQVY QPADNLEACW HTTQVLARYR CNERGQLIEA GNALYEAERY RYDARNVILE
RQLAGGASFF WEWEGEGKQA RAVHHWASFP QMDSRYVWNE DGSVTAINAD GSEEVYVHDD
NARLVRQVDP DGGETLRHYD EKGQLVAERD PLGTITEYRY DQAGRLEALL PAEGEPTCYS
YFDGFVRSVR RGEAQWKYER NTQGDITRQT DPEGNVTHYA YDHRGCLVEI THADGSLHQL
TWNPLGQLIE EQLPDGSVRR YRYDTLGRQI TRQDESGAIT RFQWDAAGRL SQITLPGGAS
RMYRYNAYGK VTSECDEQGR MTRYEYLDDL HLVSRRINPD GSQLRYRYEN ARLLLSEIEN
ERGERYRLDY HGNGLISQET GFDGRRTAYR YDLKGQLLEK TEYGDDGSEL RTTYQRDSTG
RLLAKTLPDG NRVDYRYDTL GRLVAVDDGT WPLAYEYDLR DRLVREHQGW ATLHYAYDAL
GQLIHCRLPD GNRVDYRYQT GGTLSAIDLN GQSLTRHQFG SGRERQRQQG ELLSQYHYDE
QGRLLAHQVS QRQRHLYQRQ YRYDASGNLA AIEDSRKGIR SFHYDPLDRL LGVRGETPES
FVHDPAGNLL AQGGQFDARQ MEVRGNRLLT QGDRHFDYDA HGNLVRERRG TGQKLVTEYS
YDCQHRLIGV SLPDGRQVVY RYDAFGRRIA KQVDGRNTEF LWLGERLLAE SGDRHYRTYL
YEPDSFRPLA LLDGEGPEQV EPCYYQLDHL GTPQELTRAD GRLCWSARYR AYGNVLKLDI
AEVDNPLRFQ GQYFDAETGL HYNRHRYYNP STGRYLTPDP IRLAGGLNSY RYVPNPTGWV
DPLGLASNKT RCPEALDNNP RKGINSTSGS KKPAGPIVEL DAQGNEIYYR TLSEQHLEIL
RNNFEVPPTS ETFISPLQSY SQEYDGKLVR LTASPGTMNE LSKIGVTANS GTGLLLPDLP
PARKGWKQNN ALFKLEALKK PTINEGGGVI NTGLGDGKAL EIFNKNLIDF EVID
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