Gene PA14_43020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_43020 
Symbol 
ID4382921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3827167 
End bp3827574 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content64% 
IMG OID639326022 
Producthypothetical protein 
Protein accessionYP_791587 
Protein GI116049608 
COG category[S] Function unknown 
COG ID[COG3518] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03357] type VI secretion system lysozyme-related protein 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.434691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAT ACGGCAGCCT GTTCGAGCGC CTGAACGGCG ACGCGGATAA GCGCGTCGGC 
TGGAGCCGCG AGGTTTCCGC CATGGCGTCG GTGGCTGCCC ATCTGGGCAA GATGCTCAGC
ACCCGGGCGG GCAGCGTGCA GACGCTGTCC GACTACGGGT TGCCCGATCT CAACGACATG
CGCCTGAGCC TGCACGACTC CCTGAGCCAG GCCCGCTCGG CCATCGAAGG TTTCATCGAG
GCTTACGAAC CGCGCTTGAG CAACGTGCGT GTCGTTTCCC TGCCGCGCGA CAACGACCAG
CTCCGCCTGG CCTTCAGCAT CGAAGGGTTG CTGGAGGTGG AAGGTTTCAA GCGCCAGGTG
AGTTTTTCCG CATGCCTGGA TGGCAGCGGC CAGGTGAAGG TCAGCTAA
 
Protein sequence
MTGYGSLFER LNGDADKRVG WSREVSAMAS VAAHLGKMLS TRAGSVQTLS DYGLPDLNDM 
RLSLHDSLSQ ARSAIEGFIE AYEPRLSNVR VVSLPRDNDQ LRLAFSIEGL LEVEGFKRQV
SFSACLDGSG QVKVS