Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_42980 |
Symbol | |
ID | 4382924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3821431 |
End bp | 3824064 |
Gene Length | 2634 bp |
Protein Length | 877 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639326019 |
Product | putative ClpA/B-type protease |
Protein accession | YP_791584 |
Protein GI | 116049611 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.172523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0852173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGA TCAACGTAGA CCTGCAACAA CTGATTCAGG CGCTGGATGC CGACACCCGG CGCGACCTCG AAGGCTCGGC CGAGCGCTGC GTAGCCCGTG GCGGCAGCAA GGTACTGGTG GAGGACCTGT TGCTGGGCCT GCTGGAGCGT CCCCAGGGAC TGCTGGCGCG CGCCCTGCAG GATGCCGCGG TGGACGCCGG CGAACTCAAC GCCGCGTTGC AAGCGCGGGG CGAGCACAGC GCCTCGCGCA ATCCGGTGTT CGCGCCCGAG CTGGTGCAGT GGCTGCAGGA TGCGCTGTTG CTGGCCAACC TCGAACTGGG CCGTAGCCAG ATCGACCAGG CGGCATTGAT CCTGGCCCTG CTACGCAACC CGTTGCGCTA TGCCGGCAGC CGCTACCAGC CGCTGCTGGC GCGGCTCGAC ATCGAGCGGT TGAAGGATTT CGCGCTCTCG CAGCCGCTGG AGGGCGCGCC CAGCGGCAAG CCGGGCGGCG GCGAGTCCCT GTTGCAGCGT TTCACCCACA ACCTTACCCA GCAGGCGCGC GACGGCAAGC TCGATCCGGT GCTCTGTCGC GACGGGGCTA TTCGCCAGAT GGTCGACATC CTGGCCCGTC GGCGGAAAAA CAACCCCATC GTGGTCGGCG AGGCTGGCGT CGGCAAGACC GCCATCGTCG AAGGCCTGGC CTCGCGGATC GCCGCAGGGG AAGTGCCGCC GGCGCTGAGG GACGTCGAGC TGTTGTCCCT CGACATGGGC CTGTTGCAGG CCGGTGCCAG CGTGAAGGGC GAGTTCGAGC GGCGCCTGAA AGGCGTCATC GACGAAGTGA AGGCAGCGCC CAGGCCGACC ATCCTGTTCA TCGACGAGGC CCATACGCTG ATCGGCGCGG GCGGTCAGGC CGGCGGCTCG GATGCCGCCA ACCTGCTCAA GCCGGCCCTG GCACGTGGCG AGTTGCGCAC CATCGCGGCG ACGACCTGGG CCGAATACAA GAAGTATTTC GAGAAGGACC CGGCGCTGGC CCGGCGCTTC CAGCCCGTGC AGTTGCATGA GCCGAGCGTT GCCGAGGCGG TGACGATCCT GCGTGGCCTG GCCCGGGTTT ACGAGGAAAG CCACGGTATC TACCTGCGCG ACGACGCGGT GGTGGCCGCC GCCGAACTGT CCGCCCGCTA CCTGGCGGGT CGCCAGTTGC CGGACAAGGC CGTCGACGTC CTCGACACCG CCTGTGCGCG GGTGCGCATC AGCCTGGCGG CGGCGCCGGA GAGCCTCGAG CGCCTGCGCG GCGAGCTGGC CGAAGGTGAG CGCCAGCGCC AGGCCCTGCG CCGCGATGCC GAGGCAGGCC TGCCGATCGA CCACGATGCC CTGCAGGCGC TGGAGGAGCG TCTGGCCCAG GCGGAAAGCG AGCGGCACGT ACAGGAGGAC CAGTGGAGCC GCCAGCGCGA ACTCGCCGAG CGCCTGCTCG CCCTGCGCCA GCAATTGGCC AGGGCCCGCG AGGCGAACCG GGAAGAGCAG GGCAGCGAGG CGGATGCGGA GGCTTTCCCG GCCGACGAGC ATGGCGGTGT CGAAGCCCTG GAAAAGGCCC TTCACGAAAC CCGCCAGGCG CTCGCCGATG CCCAGGCCCA GGGGCGGCTG GTCAGCTTCG AGGTCTGCCC GCGCCTGGTT GCCGAGGTGA TCGGCGCCTG GACCGGCGTA CCGGTGGAAC AACTGGCGCG GGAACACAAC GCCAAGGTGA TGGGGTTCGC TGACGACCTG CGGGCGCGGA TCCGTGGCCA GGAACAGGCG GTCAGCGCCC TGGACCGCGC GATGCGCGCC ACCGCGGCCG GGCTGAACAA GCCCGATGCG CCGGTCGGCG TGTTCCTGCT GGTGGGCCCG AGCGGGGTGG GCAAGACCGA GACCGCGCTG GCGCTGGCCG ACCTGCTGTA TGGCGGCGAG CGTTTCATCA CCACCATCAA CATGTCCGAG TTCCAGGAGA AGCACACCGT CTCGCGCCTG ATCGGCGCGC CGCCCGGCTA TGTCGGCTAT GGCGAGGGTG GCATGCTCAC CGAGGCGGTA CGCCAGAAGC CCTATTCGGT GATATTGCTG GACGAGGTGG AGAAGGCCGA TCCGGACGTG CTCAACCTGT TCTACCAGAT CTTCGACAAG GGCGTGGCCA ACGATGGCGA AGGGCGCGAG ATCGATTTCC GCAATACCTT GATCCTGATG ACCTCCAACC TCGCCAGCGA GCACATCGCC GCGCTTTGCC AGGACGGCGC GCGGCCTTCC GCCGAACTCC TGGAGGAAAC CATCCGGCCG GCGCTCAGCC GGCATTTCAA GCCGGCGCTG CTGGCGCGCA TGCGCGTGGT GCCTTACTAC CCGGTGGGCG GCCCGGTACT GCGCGAGCTG ATCGAGATCA AGCTGGAACG CCTCGGCGAG CGTCTGGCGC GCCGTCAACT GGCTTTCGAC TACAGCCAGG CGCTGGTGGA CCACCTGGCC GAGCGTTGCA CCCAGAGCGA CAGCGGCGCA CGGTTGATCG ACCACCTGCT GGACACGCAC CTGCTGCCGC TGGTGGCCGA CCGTTTGCTG GAAGCGATGG CGCGCGACGA GCGTCTCGAG CGGGTCCATG CGACGCTGGG CGAGCACGGC CGCGTGCTCT GCGAGTTCGC CTGA
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Protein sequence | MSMINVDLQQ LIQALDADTR RDLEGSAERC VARGGSKVLV EDLLLGLLER PQGLLARALQ DAAVDAGELN AALQARGEHS ASRNPVFAPE LVQWLQDALL LANLELGRSQ IDQAALILAL LRNPLRYAGS RYQPLLARLD IERLKDFALS QPLEGAPSGK PGGGESLLQR FTHNLTQQAR DGKLDPVLCR DGAIRQMVDI LARRRKNNPI VVGEAGVGKT AIVEGLASRI AAGEVPPALR DVELLSLDMG LLQAGASVKG EFERRLKGVI DEVKAAPRPT ILFIDEAHTL IGAGGQAGGS DAANLLKPAL ARGELRTIAA TTWAEYKKYF EKDPALARRF QPVQLHEPSV AEAVTILRGL ARVYEESHGI YLRDDAVVAA AELSARYLAG RQLPDKAVDV LDTACARVRI SLAAAPESLE RLRGELAEGE RQRQALRRDA EAGLPIDHDA LQALEERLAQ AESERHVQED QWSRQRELAE RLLALRQQLA RAREANREEQ GSEADAEAFP ADEHGGVEAL EKALHETRQA LADAQAQGRL VSFEVCPRLV AEVIGAWTGV PVEQLAREHN AKVMGFADDL RARIRGQEQA VSALDRAMRA TAAGLNKPDA PVGVFLLVGP SGVGKTETAL ALADLLYGGE RFITTINMSE FQEKHTVSRL IGAPPGYVGY GEGGMLTEAV RQKPYSVILL DEVEKADPDV LNLFYQIFDK GVANDGEGRE IDFRNTLILM TSNLASEHIA ALCQDGARPS AELLEETIRP ALSRHFKPAL LARMRVVPYY PVGGPVLREL IEIKLERLGE RLARRQLAFD YSQALVDHLA ERCTQSDSGA RLIDHLLDTH LLPLVADRLL EAMARDERLE RVHATLGEHG RVLCEFA
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