Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_42950 |
Symbol | |
ID | 4382927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3818469 |
End bp | 3819662 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639326016 |
Product | hypothetical protein |
Protein accession | YP_791581 |
Protein GI | 116049614 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.171842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGG TATTGGAAAT GCTCAGCGCC AAGCAATTCG TACCGACGGA GCTGTGCAGC AAGACCTTCG GCAGGAACGG CGGCCTCATC GGCCGCGGCG GTGAGTGCGA CTGGGCGATT CCCGATCGCA AGCGGCACCT GTCCAAGCAG CATGCGCGGG TCAGCTATCG CAACGGCGCG TTCTACCTGA CCGACACCAG CAGCAACGGC ATCCGCGCCG GCAACGGCAG CCGCCTGCCG CATGGCGAGC CGCAGCGCAT CGAGCAGGAC AGCGTCTTCC TGCTCGGCGA CTTCGAGATC CGCGCGCGGT TGCTGCGCGA GCCCGACGAG CTCGCCATGG ACGTCGGGCG GCCGCAGCCG GCGGGCAGCA TCATTCCGGA CGATGCCTTC CTGGCCCTCG ATCCGTTGCA GGCGCTCGAC CAGGACGGTG CAGATGCCTA CGAACTCGAC GACCTGAGCG CGATTGCCCA GCCCAGCCAG GAGGCCGGGG CGCGTGCGGA CTACGCGCGG ATCGACATGG AAAGCCTGGT CGTACCGGAG CTGGTGCCCG CCCCGGCGGC TCCGCAGGAA CCCGTGGAAA GTCCGCGTCC GGGTCACGAC GAAGCCTTCT GGCAGCGTTT CGGCCAGGCC CTGGGAATGG ACCTCGAAGG CCTCGACGGC GCTGCGCGCG AAGCGCTGGC GATCAACGCC GCCGGTTTGC TGCGGCAGTG CATCGGCGGC TTGCAGCAGA GCCTGCGGAC CCGCAGCGAA CTGAAGAACG AACTGCGCCT GTCGCTGAGC ACGTTGCGCG ATACCGGCAA GAATCCCTTG CGCTTCAGCG CCGATGCCGG CGAGGCGCTG GGTCATCTGC TACGGGATGG CAAGCCTGGC CAGTTGAGTG GCGAACAGGC CGTCGCACGC AGTTTCCGCG ACCTCCAGGC GCACCAGGTG GCGCTGCTCG GCGCCAGCCG GGCGGCGGTG CGCGCGACCC TCGAGCATTT CTCGCCGCAG CAGCTGACCC TGCGTTTCGA GCGCGACGGC CGCCGGCCGT TGCTGGCCAC CTCGGGCAGC CGCTGGCGTG CCTATGGTCG CTACCACCAG TCGCTATGCC AGGACGACGA CTGGAGCGAG CGCCTGCTGG CACGTGATTT CGCCCAGGCC TACGAAGAGC AGGTTCGCCT GATTTCCACC CTCTACACCG AGCACCAAGG ATGA
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Protein sequence | MELVLEMLSA KQFVPTELCS KTFGRNGGLI GRGGECDWAI PDRKRHLSKQ HARVSYRNGA FYLTDTSSNG IRAGNGSRLP HGEPQRIEQD SVFLLGDFEI RARLLREPDE LAMDVGRPQP AGSIIPDDAF LALDPLQALD QDGADAYELD DLSAIAQPSQ EAGARADYAR IDMESLVVPE LVPAPAAPQE PVESPRPGHD EAFWQRFGQA LGMDLEGLDG AAREALAINA AGLLRQCIGG LQQSLRTRSE LKNELRLSLS TLRDTGKNPL RFSADAGEAL GHLLRDGKPG QLSGEQAVAR SFRDLQAHQV ALLGASRAAV RATLEHFSPQ QLTLRFERDG RRPLLATSGS RWRAYGRYHQ SLCQDDDWSE RLLARDFAQA YEEQVRLIST LYTEHQG
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