Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_42520 |
Symbol | |
ID | 4380199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3785731 |
End bp | 3786096 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639325979 |
Product | hypothetical protein |
Protein accession | YP_791544 |
Protein GI | 116049651 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02502] type III secretion protein, YscX family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGGG TCGGTGCCTG GCACATCGGC ATCGAACGAC TCGACCTGGC GCATGCCGAG CCGTTCGCGC CGCCCCTGCC GGAGCGCCAT CTACTGGCGC CCGACGGCCG GCCGGTCGAG ACCCACGTCG CCAGCCTGTA TCCCGCGCAG CAGGCGCAAC AGCGCCTGTT CGACTACGCC CGGCCCCAGC TGGAGTTCCA CGGCCTGCTG CGCCCCGGCG ACTTCCGCCA GGCGCTGCGC GATCTCCGCC TGGCCCTCAC GCTGCCCGGC CAGCCAGCCC TGCAGGCTGC GGCCTGCCTG CTCGGCGAGC GCGACGAAGA CGAGCGACTG CTGCAAATGG CCCTGAACCT GTTGCACAAG GTATGA
|
Protein sequence | MSRVGAWHIG IERLDLAHAE PFAPPLPERH LLAPDGRPVE THVASLYPAQ QAQQRLFDYA RPQLEFHGLL RPGDFRQALR DLRLALTLPG QPALQAAACL LGERDEDERL LQMALNLLHK V
|
| |