Gene PA14_42520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_42520 
Symbol 
ID4380199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3785731 
End bp3786096 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content71% 
IMG OID639325979 
Producthypothetical protein 
Protein accessionYP_791544 
Protein GI116049651 
COG category 
COG ID 
TIGRFAM ID[TIGR02502] type III secretion protein, YscX family 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGG TCGGTGCCTG GCACATCGGC ATCGAACGAC TCGACCTGGC GCATGCCGAG 
CCGTTCGCGC CGCCCCTGCC GGAGCGCCAT CTACTGGCGC CCGACGGCCG GCCGGTCGAG
ACCCACGTCG CCAGCCTGTA TCCCGCGCAG CAGGCGCAAC AGCGCCTGTT CGACTACGCC
CGGCCCCAGC TGGAGTTCCA CGGCCTGCTG CGCCCCGGCG ACTTCCGCCA GGCGCTGCGC
GATCTCCGCC TGGCCCTCAC GCTGCCCGGC CAGCCAGCCC TGCAGGCTGC GGCCTGCCTG
CTCGGCGAGC GCGACGAAGA CGAGCGACTG CTGCAAATGG CCCTGAACCT GTTGCACAAG
GTATGA
 
Protein sequence
MSRVGAWHIG IERLDLAHAE PFAPPLPERH LLAPDGRPVE THVASLYPAQ QAQQRLFDYA 
RPQLEFHGLL RPGDFRQALR DLRLALTLPG QPALQAAACL LGERDEDERL LQMALNLLHK
V