Gene PA14_42160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_42160 
Symbol 
ID4380366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3760790 
End bp3762202 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content66% 
IMG OID639325950 
Producthypothetical protein 
Protein accessionYP_791515 
Protein GI116049680 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TGTTTTACGA CGAGATGCAC GATGCTGGCG GCGAATGCCG CTCGCATTAT 
CGGGAATTCG CTCGCTGGCT GGCCGACACC CCTGAAGAGC AATTGCTGCA ACGCCGGCGC
GAAGCCGACC TGCTGTTCCA CCGCGCCGGC ATCACCTTCA CCCTGTACGG CGACGAGCAG
GGCACCGAGC GCCTGATCCC CTTCGACACC ATCCCGCGCA GCATTCCCGC GGCGGAGTGG
GCGCACATCG AGGCCGGCTG CATCCAGCGC GTCCAGGCGC TGAACCTGTT CCTCGCCGAT
CTCTACCACG AACAGCGCAT CCTCAAGGCC GGCGTGATTC CTGCCGAGCA GGTCCTGGCC
AACGACCAGT ACCAACTGGC GATGCAGGGA CTGGACCTGC CGGGCAACGT CTACGCGCAC
ATTGCCGGGG TTGACCTGGT CCGCGACGGC AGCGGCAACT ACTACGTGCT GGAGGACAAC
CTGCGCACGC CCAGCGGTGT TTCCTACATG CTGGAAAACC GCAAGATGAT GATGCGCCTG
TTCCCCGAGC TGTTCGTCCG CCAGCGCGTG GCGCCGATCG ACCACTACCC GGACCTGCTG
CTCGACACCC TCAAGCGGGC CAGTGACGTC GAATCGCCGA GCGTGGTGGT ATTGACGCCG
GGACGTTTCA ACAGCGCCTA CTTCGAACAC GCCTTCCTCG CCCGCGAGAT GGGCGTGGAA
CTGGTCGAAG GCGCCGATCT GTTCGTCCGC GACGAGCGGG TCTACATGCG CACGACGGCC
GGACCGCAAC CGGTGGACGT GATCTACCGA AGGATCGACG ACGCCTTCCT CGACCCGCTG
GCGTTCAACC CGGATTCGCT GCTCGGCGTG CCCGGCCTGC TGGCCGCCTA CCGGGCCGGC
AACCTGGTGC TGGCCAACGC GATCGGTACC GGGGTGGCCG ACGACAAGTC GATCTACCCC
TACGTGCCGG ACATGATCCG CTTCTACCTC GGCGAAGACC CGCTGCTGCA CAACGTGCCG
ACCTGGCAAT GTCGCAAGCC GAAGGAACTG GCGCACGTCC TGGCGCACCT GCCGGAGCTG
GTGGTGAAGG AGACCCAGGG TTCCGGCGGC TACGGCATGC TGGTCGGACC GGCGGCCAGC
CGGGAGGAAA TCGAGCTGTT CCGCGAGCGC CTGAAGGCTC GCCCGGAGGC CTATATCGCG
CAACCGACGC TGTCCCTGTC GACCTGTCCG ACTTTCGTCG AGAGCGGCGT CGCGCCACGC
CATATCGACC TGCGGCCGTT CGTCCTGTCG GCGCCGGATC GGGTTCGCCT GGTGCCTGGC
GGGCTGACCC GGGTGGCGTT GCGCGAAGGC TCGCTGGTGG TCAATTCGTC CCAGGGCGGC
GGCACCAAGG ACACCTGGGT GGTGGAGGAA TAA
 
Protein sequence
MARMFYDEMH DAGGECRSHY REFARWLADT PEEQLLQRRR EADLLFHRAG ITFTLYGDEQ 
GTERLIPFDT IPRSIPAAEW AHIEAGCIQR VQALNLFLAD LYHEQRILKA GVIPAEQVLA
NDQYQLAMQG LDLPGNVYAH IAGVDLVRDG SGNYYVLEDN LRTPSGVSYM LENRKMMMRL
FPELFVRQRV APIDHYPDLL LDTLKRASDV ESPSVVVLTP GRFNSAYFEH AFLAREMGVE
LVEGADLFVR DERVYMRTTA GPQPVDVIYR RIDDAFLDPL AFNPDSLLGV PGLLAAYRAG
NLVLANAIGT GVADDKSIYP YVPDMIRFYL GEDPLLHNVP TWQCRKPKEL AHVLAHLPEL
VVKETQGSGG YGMLVGPAAS REEIELFRER LKARPEAYIA QPTLSLSTCP TFVESGVAPR
HIDLRPFVLS APDRVRLVPG GLTRVALREG SLVVNSSQGG GTKDTWVVEE