| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_41530 |
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| Symbol | nirB |
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| ID | 4382886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3706047 |
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| End bp | 3708497 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639325899 |
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| Product | assimilatory nitrite reductase large subunit |
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| Protein accession | YP_791464 |
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| Protein GI | 116049729 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA TCAAGCTGGT AATGGTCGGC AACGGCATGG CCGGGGTCCG TACCCTGGAA
GAACTGCTCA AGCTCAACTC GGACTTCTAC GACATCACGG TGTTCGGCGC CGAGCCCCAT
CCCAACTACA ACCGCATCCT GCTGTCCCCG GTACTGGCCG GCGAGCAGAC CTTCGAGGAA
ATCGTCCTCA ACGACCTCAA CTGGTATGCG GAAAACGGCA TCAAGCTCCT CCTCGACCGC
AAGGTGGTGC AGATCGACCG GGTCCGCCGC AGGGTGGTCG CCGCGGACGG CAGCGAGGCC
GAGTACGACC GCCTGCTGCT GGCCACCGGC TCGGTCCCCT TCATCCTGCC GATACCCGGC
AATCGGCTGC AGGGCGTGAT CGGCTACCGC GACATCGCCG ACACCCAGGC CATGATCGAC
TGCGCCCGGA CCCACAGCCA CGCGGTGGTG ATCGGCGGCG GCCTGCTCGG CCTGGAGGCG
GCCAACGGCC TCAAGCAACG CGGCATGGAC GTGACCGTCG TGCACCTCTC CGACTGGCTG
CTTGAACGCC AACTGGACCG CACCGCCGGC AAACTCCTGC AAGGCGCGCT GGAAGCCCGC
GGCATCCGCT TCCGCCTGAA CACCCAGACC CAGGAACTGA TGGACAACGG CAGCGGCCGG
GTCTGTGCCG TGCAGTTCAA CGACGGCGAC GTGATTCCCG CCGACCTGGT GGTAATGGCC
GCCGGTATCC GCCCCAACAC CGAGCTGGCC GAAAGCGCAG GCATCCCCTG CAACCGCGGC
ATCCTGGTCA ACGACACCCT GCAGACCTAC GACCCACGCA TCTATGCGGT CGGCGAATGC
GCCAACCACC GTGGCATCGC CTACGGCCTG GTTGCGCCGC TGTTCGAGCA GGCCAAGGTC
TGCGCCAACC ACCTGGCTCA TCTCGGCTAC GCCCGCTACC AGGGCTCGGT GACCTCGACC
AAGCTCAAGG TGACCGGTAT CGACCTGTTC TCCGCCGGCG ACTTCATCGG CGGCGAAGGC
AGCGAGACCA TCACCCTTTC CGACCCCATC GGCGGCGTCT ACAAGAAACT GGTGATCAAG
GACGATGTAC TGGTCGGCGC CTGTCTCTAC GGCGACACCG CCGACGGCGG CTGGTACTTC
CGGCAGATCC GCGAGAACCA CAACGTCGCG CAGATCCGCG ACCACCTGAT GTTCGGCGAG
AACGCCCTCG GCGATGTCGG CCACCAGGGC CAGAACAGCG CCGCGAGCAT GCCCGACACG
GCCGAAGTAT GCGGCTGCAA CGGCGTCTGC AAGGGCACCA TCGTCAAGGC GATACAAGAA
CACGGCCTGT TCAGCGTCGA CGAAGTCAAG AAACACACCA AGGCCGCCAG CTCCTGCGGC
TCCTGCGCGG GATTGGTGGA ACAGATCCTG ATCAGCACCG TCGGCGGCGC CGCCGACGTC
AAGCCGAAGA GCGAGAAGGC CATCTGCGGC TGCAGCGACC TCAACCACGG GCAGATCCGC
AAGGCCATTC GCGAACACCG GCTGACCAGT CTCGACGCCG TCATGCGCTT CATGGACTGG
AAGACCCCGA ACGGCTGTGC CACCTGCCGC CCGGCCCTGA ACTATTACCT GATCTCGACC
TGGCCGGGAG AAGCCAAGGA CGATCCGCAG TCGCGCCTGA TCAACGAACG CGCCCACGCC
AACATCCAGA AGGACGGCAC CTACTCGGTG GTACCGCGGA TGTGGGGCGG CGTGACCAAC
GCCGCCGAGT TGCGGCGCAT CGCCGACGTC GCCGACAAGT ACCAGGTGCC GATGGTCAAG
GTCACCGGTG GCCAGCGCAT CGACCTGCTG GGGGTGAAGA AGGACGACCT GCCGGCCATC
TGGAAAGACC TCGACATGCC CTCCGGACAT GCCTACGGCA AATCCATCCG CACCGTGAAG
ACCTGCGTCG GCAGCGAGTT CTGCCGCTTC GGCACGCAAA ACTCGACGCA GCTGGGCATC
GATCTGGAAC ACGACCTGTT CAACATGTGG TCGCCGCACA AGGTCAAGCT GGCGGTCTCC
GGCTGCCCGC GCAACTGCGC CGAGGCCGGG ATCAAGGACG TCGGCATCAT CGGCGTGGAC
TCCGGCTGGG AGATGTACAT CGGCGGCAAC GGCGGGATCA AGACCGAGGT CGCGGAGTTC
TTCGTCAAGC TCAAGACCGC CGAAGAAGTG CGCGAATACA ACGGCGCCTT CCTCCAGCTC
TACCGCGAGG AAGCCTTCTA CCTGGAGCGC ACGGTGCATT ACCTGCAGCG GGTCGGCATG
GAGCACATCC GCAAGGCGGT GGTCGAGGAC GCGGAAAACC GCAAGGCGCT CAACGACCGC
CTGCAATTCG CCCTGTCCTT CGAGCAGGAC CCATGGAAGC AGCGCATCGA ACAGCCGCAA
TTGAAGAAGG AGTTCGAACG GATTCCGCTC AAGCAACTGG AAAACGTCTG A
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| Protein sequence | MKKIKLVMVG NGMAGVRTLE ELLKLNSDFY DITVFGAEPH PNYNRILLSP VLAGEQTFEE
IVLNDLNWYA ENGIKLLLDR KVVQIDRVRR RVVAADGSEA EYDRLLLATG SVPFILPIPG
NRLQGVIGYR DIADTQAMID CARTHSHAVV IGGGLLGLEA ANGLKQRGMD VTVVHLSDWL
LERQLDRTAG KLLQGALEAR GIRFRLNTQT QELMDNGSGR VCAVQFNDGD VIPADLVVMA
AGIRPNTELA ESAGIPCNRG ILVNDTLQTY DPRIYAVGEC ANHRGIAYGL VAPLFEQAKV
CANHLAHLGY ARYQGSVTST KLKVTGIDLF SAGDFIGGEG SETITLSDPI GGVYKKLVIK
DDVLVGACLY GDTADGGWYF RQIRENHNVA QIRDHLMFGE NALGDVGHQG QNSAASMPDT
AEVCGCNGVC KGTIVKAIQE HGLFSVDEVK KHTKAASSCG SCAGLVEQIL ISTVGGAADV
KPKSEKAICG CSDLNHGQIR KAIREHRLTS LDAVMRFMDW KTPNGCATCR PALNYYLIST
WPGEAKDDPQ SRLINERAHA NIQKDGTYSV VPRMWGGVTN AAELRRIADV ADKYQVPMVK
VTGGQRIDLL GVKKDDLPAI WKDLDMPSGH AYGKSIRTVK TCVGSEFCRF GTQNSTQLGI
DLEHDLFNMW SPHKVKLAVS GCPRNCAEAG IKDVGIIGVD SGWEMYIGGN GGIKTEVAEF
FVKLKTAEEV REYNGAFLQL YREEAFYLER TVHYLQRVGM EHIRKAVVED AENRKALNDR
LQFALSFEQD PWKQRIEQPQ LKKEFERIPL KQLENV
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