Gene PA14_41500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_41500 
Symbol 
ID4382889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3701850 
End bp3702545 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content62% 
IMG OID639325896 
Productputative lyase 
Protein accessionYP_791461 
Protein GI116049732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATC TCAGCACCTG GAACCTTACC ATTCCCACCG AACCCACCCC GCAGGTGATC 
ACCACCCAGC AACTCAACAA CGGCTACCAG AGCCGGTACT TCCAGCAAGG CAACGATGGC
GGCCTGGTCT TCTGGGTGCC CATCGACGGC TCGCACACCG AGGACAGCAC CTATCCTCGC
ACCGAACTGC GCGAAACCCA GGCCGACGGC AGCCTCGACA ACTGGTACTA CTGGCAGGCC
GACAACGAAT TGCGGGTGAC CATGAGCGTC GAGAAGGTCC CCTCGAAGAA CAAGGTGATC
ATCGGCCAGA TCCACAGCAA GTCGCCACAG ACCGACGACG GCGAACCTCT GGTGAAGCTG
CAGTACTACT ACAAGCCCGA GGAAGGCCTC GGCCGGGTCG AGGCGCTGGT ACGCAACCAC
CCGGACGATT CCTATAGCCG CAACGTGTCG ATCCTCGAGC AGGTACGCCT GGGCGAGCGT
TTCAACTACA GCCTGCGCGT CACCTCCAGC GGCGAGTTGG CGGTGCGCGC ACGCAGCCAG
GACGGCGAAG AGGACGCTTA CTACCAGACC CTCGGCAGCG CCTGGAACGA CCAGTTGCTC
TATTTCAAGG CCGGCGCCTA CGTGAACGAC AACGCCGGCG ACAGCGGCGA AGGCAGCCGC
GTGACCATCT ACCACCTGAA CACCGCCCAT CGCTGA
 
Protein sequence
MIDLSTWNLT IPTEPTPQVI TTQQLNNGYQ SRYFQQGNDG GLVFWVPIDG SHTEDSTYPR 
TELRETQADG SLDNWYYWQA DNELRVTMSV EKVPSKNKVI IGQIHSKSPQ TDDGEPLVKL
QYYYKPEEGL GRVEALVRNH PDDSYSRNVS ILEQVRLGER FNYSLRVTSS GELAVRARSQ
DGEEDAYYQT LGSAWNDQLL YFKAGAYVND NAGDSGEGSR VTIYHLNTAH R