| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_41020 |
|---|
| Symbol | |
|---|
| ID | 4381040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 3657602 |
|---|
| End bp | 3659857 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639325856 |
|---|
| Product | putative Orn/Arg/Lys decarboxylase |
|---|
| Protein accession | YP_791425 |
|---|
| Protein GI | 116049768 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATAAAG ACCTCAAATT TCCCGTCCTC ATCGTCCATC GCGACATCAA GGCCGACACC
GTTGCCGGCG AACGCGTGCG GGGCATCGCC CACGAACTGG AGCAGGACGG CTTCAGCATT
CTCTCCACCG CCAGCTCCGC CGAGGGGCGC ATCGTCGCTT CCACCCACCA CGGCCTGGCC
TGCATCCTGG TCGCCGCCGA AGGTGCCGGG GAAAACCAGC GCCTGCTGCA GGATGTGGTC
GAACTGATCC GCGTGGCCCG CGTGCGGGCG CCGCAATTGC CGATCTTCGC CCTCGGCGAG
CAGGTGACCA TCGAGAACGC GCCGGCCGAG TCCATGGCCG ACCTGCACCA GTTGCGCGGC
ATCCTCTACC TGTTCGAAGA CACCGTGCCG TTCCTCGCCC GCCAGGTCGC CCGGGCGGCG
CGCAACTACC TGGCCGGGCT GCTGCCGCCA TTCTTCCGTG CGCTGGTCGA GCACACCGCG
CAGTCCAACT ATTCCTGGCA TACGCCGGGC CACGGCGGCG GTGTCGCCTA TCGCAAGAGT
CCGGTGGGAC AGGCGTTCCA CCAGTTCTTC GGGGAGAACA CGCTGCGTTC CGACCTGTCG
GTCTCGGTCC CCGAGCTGGG CTCGCTGCTC GACCATACCG GCCCCCTGGC CGAGGCCGAG
GACCGTGCCG CGCGCAATTT CGGCGCCGAC CATACCTTCT TCGTGATCAA TGGCACTTCC
ACCGCGAACA AGATCGTCTG GCACTCCATG GTCGGTCGCG AAGACCTGGT GCTGGTGGAC
CGCAACTGCC ACAAGTCGAT CCTCCACTCG ATCATCATGA CCGGGGCGAT ACCGCTCTAC
CTGACTCCGG AACGCAACGA ACTGGGGATC ATCGGGCCGA TCCCGCTGAG CGAATTCAGC
AAGGAGTCGA TCGCCGCGAA GATCGCCGCC AGCCCGCTGG CGCGCGGCCG CGAGCCGAAG
GTGAAGCTGG CGGTGGTGAC CAACTCCACC TACGACGGCC TGTGCTACAA CGCCGAGCTG
ATCAAGCAGA CCCTCGGCGA CAGCGTCGAG GTGTTGCACT TCGACGAGGC TTGGTACGCC
TATGCCGCGT TCCACGAGTT CTACGACGGA CGCTATGGCA TGGGCACCTC GCGCAGCGAG
GAGGGCCCCC TGGTGTTCGC CACCCACTCC ACGCACAAGA TGCTCGCCGC CTTCAGCCAG
GCCTCGATGA TCCACGTGCA GGATGGCGGG ACCCGGAAGC TGGACGTGGC GCGCTTCAAC
GAAGCCTTCA TGATGCACAT CTCGACCTCG CCGCAGTACG GCATCATCGC TTCGCTGGAC
GTGGCTTCGG CGATGATGGA AGGGCCCGCC GGGCGTTCGC TGATCCAGGA GACCTTCGAC
GAGGCCCTCA GCTTCCGCCG GGCCCTGGCC AACGTACGGC AGAACCTGGA CCGGAACGAC
TGGTGGTTCG GCGTCTGGCA GCCGGAGCAG GTGGAGGGCA CCGATCAGGT CGGCACCCAT
GACTGGGTGC TGGAGCCGAG CGCCGACTGG CACGGCTTCG GCGATATCGC CGAAGACTAC
GTGCTGCTCG ATCCGATCAA GGTCACCCTG ACCACCCCGG GCTTGAGCGC CGGCGGCAAG
CTCAGCGAGC AGGGGATTCC GGCTGCCATC GTCAGCCGCT TCCTCTGGGA GCGCGGGCTG
GTGGTGGAGA AAACCGGTCT CTACTCCTTC CTGGTGCTGT TCTCGATGGG CATCACCAAG
GGCAAGTGGA GCACCCTGGT CACCGAACTG CTCGAATTCA AGCGCTGTTA CGACGCCAAC
CTGCCGCTGC TCGACGTCTT GCCCTCCGTG GCCCAGGCCG GCGGCAAGCG CTACAACGGC
GTGGGCCTGC GCGACCTCAG CGACGCCATG CACGCCAGCT ACCGCGACAA CGCCACGGCG
AAGGCCATGA AGCGCATGTA CACGGTGCTG CCGGAGGTCG CGATGCGGCC GTCCGAGGCC
TACGACAAGC TGGTGCGCGG CGAGGTCGAG GCGGTACCGA TCGCTCGGTT GGAAGGGCGC
ATCGCTGCCG TCATGCTGGT ACCCTATCCG CCGGGTATCC CGCTGATCAT GCCGGGTGAG
CGCTTCACCG AGGCGACCCG CTCGATCCTC GACTATCTCG AGTTCGCGCG GACCTTCGAG
CGCGCCTTCC CTGGTTTCGA CTCCGATGTG CACGGCCTGC AGCATCAGGA CGGACCGTCC
GGGCGCTGCT ATACCGTTGA ATGCATAAAA GAATGA
|
|---|
| Protein sequence | MYKDLKFPVL IVHRDIKADT VAGERVRGIA HELEQDGFSI LSTASSAEGR IVASTHHGLA
CILVAAEGAG ENQRLLQDVV ELIRVARVRA PQLPIFALGE QVTIENAPAE SMADLHQLRG
ILYLFEDTVP FLARQVARAA RNYLAGLLPP FFRALVEHTA QSNYSWHTPG HGGGVAYRKS
PVGQAFHQFF GENTLRSDLS VSVPELGSLL DHTGPLAEAE DRAARNFGAD HTFFVINGTS
TANKIVWHSM VGREDLVLVD RNCHKSILHS IIMTGAIPLY LTPERNELGI IGPIPLSEFS
KESIAAKIAA SPLARGREPK VKLAVVTNST YDGLCYNAEL IKQTLGDSVE VLHFDEAWYA
YAAFHEFYDG RYGMGTSRSE EGPLVFATHS THKMLAAFSQ ASMIHVQDGG TRKLDVARFN
EAFMMHISTS PQYGIIASLD VASAMMEGPA GRSLIQETFD EALSFRRALA NVRQNLDRND
WWFGVWQPEQ VEGTDQVGTH DWVLEPSADW HGFGDIAEDY VLLDPIKVTL TTPGLSAGGK
LSEQGIPAAI VSRFLWERGL VVEKTGLYSF LVLFSMGITK GKWSTLVTEL LEFKRCYDAN
LPLLDVLPSV AQAGGKRYNG VGLRDLSDAM HASYRDNATA KAMKRMYTVL PEVAMRPSEA
YDKLVRGEVE AVPIARLEGR IAAVMLVPYP PGIPLIMPGE RFTEATRSIL DYLEFARTFE
RAFPGFDSDV HGLQHQDGPS GRCYTVECIK E
|
|---|
| |