Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_40910 |
Symbol | |
ID | 4381048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3648743 |
End bp | 3649648 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325848 |
Product | LysR family transcriptional regulatory protein |
Protein accession | YP_791417 |
Protein GI | 116049776 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACT TGCGCCAGTT CCGCCAGTTC GTCGCGGTTG CCGAGGAGCT GAGCTTCCGC CGCGCCGCTG AGCGCCTGCA CATGGCCCAG CCACCGCTGA CCACCGCGAT CCGGCGGCTG GAAGAAGAAG TCGGCGCCAG CCTGCTGGAG CGTGACAACC GTATCCATCG CCTGACGCCG GCGGGCCGCG CGTTCCTCGA CGAAGCCCGG CGCACCCTGG CCCAGGCCGA ACGCACCCTG GCGGCCGCGC GCAGCGCCGC CAGCGGACGC AGAACGTTGC GCCTGGCGTT CGTCGACAGC ACCATCAATA TTCTGCTACC GCGCATACTC CAGGCGTTCC GCCAACAGCA TGGCGCGCTG GACTTCCAGC TCCAGGAAGA CACCACCGCG GGGCAACTGG AGGCGCTGCG CGAAGACCGC ATCGATGCCG GCCTGATCGT CCTGCCGGTC GACCGCCAGC CCGGCCTGTA CACGCATCTA CTGGTGGACG GCGACATGCG CGTGGCATTG CCCGAAGGCC ATCGGCTGGC ACGCCATGCG CGCCTGCGCC TGGAACAACT GGCCGGAGAA CCCTGGCTGC TGTTCCCAAG GCACTATGGG CCGGGCATGC ACGACCTGAT CGTCGCCGCC TGCGCGGCAG CCGGCTTCGT CCCGGAGGTG GTGCAGGAGG CGCGGCAGAT GCAGACCATC GCCGGGCTGG TGGCCGGCGG CATCGGCGTC GCGCTAGTGC CTTCGCTGCT ACAACCGTTG CGCCCGCCGG GGGTCACCTT TCGTCCCCTG CAAGGGCGGC GGGCGCGAAT TCCCTATCGG CTGGCGTTGG CCTACCGCAC GCCGTCGGAA CTCATCGAAC GCTTTCGCGA AACCGCCCAG GCGATCGCCG CCGCCCCGGC TTTTCGCATG GCCTAG
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Protein sequence | MADLRQFRQF VAVAEELSFR RAAERLHMAQ PPLTTAIRRL EEEVGASLLE RDNRIHRLTP AGRAFLDEAR RTLAQAERTL AAARSAASGR RTLRLAFVDS TINILLPRIL QAFRQQHGAL DFQLQEDTTA GQLEALREDR IDAGLIVLPV DRQPGLYTHL LVDGDMRVAL PEGHRLARHA RLRLEQLAGE PWLLFPRHYG PGMHDLIVAA CAAAGFVPEV VQEARQMQTI AGLVAGGIGV ALVPSLLQPL RPPGVTFRPL QGRRARIPYR LALAYRTPSE LIERFRETAQ AIAAAPAFRM A
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