Gene PA14_40900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_40900 
Symbol 
ID4381049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3647850 
End bp3648611 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content69% 
IMG OID639325847 
Productputative short-chain dehydrogenase 
Protein accessionYP_791416 
Protein GI116049777 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACTC ATTCTCCAAT CCCCCGTACC GCCCTGGTCA CCGGCGGCTC GTCGGGCATC 
GGCCTGGCCA TCGCCCGGCG CCTTCGGCAA CAGGGTTATC GGATCGCCCT GGTGGCCCGT
GATTCCCAGC GCCTGCAACG CGCTGCCGCC GAGTTGGGCG GTGTGCCCTG GATGGCCGCC
GATCTTTCCC GCCGCGAAGC TGTCGAGGCG GTGGCCGCCT GGTTTGGCGA CACCTTCCAG
GGGCTCGACG TGCTGGTGAA CAACGCCGGG TTCACCCGAA AGATCGCCGC CACCACTCCG
CTGGCTGAGG CCGAGCGGGA ATGGGATGCG CTGCTGGACG GCAACCTGAA AAGCGCGTTC
CTCATGTCGC TGGCGGTGTT GCCGCATTTC GCGGAAGAGG GCGGGCGGAT CATCCATATC
GGATCGATCG CTGCGCAGAC CGGTAGCGGC AGTCCCGGTG CGCTGGGCTA TGCGGCAGCC
AAGGCCGGCC TGCATGGCTT CGGCGTGGCC CTGGCGCGGG AACTCGGTTC GCGCGGGATC
ACGGTGAACA GCGTGGCACC GGGTTACATC GCCGACACCC GGTTCTTTCC CGGCGGCCTC
GATCCGCAAC GGGTCGCCGC CATCGTCGGC GAGACCCCGC TGGGCAGGAC CGGCCGGGTC
GAGGACATCG CCGCGGCGGT GGCCTGGCTG GCCTCGCCCG AGGCGGGGTT CGTCACCGGA
ACGGTGGTGT CGGTGAACGG TGGCTGGCGG GTCGGCAACT GA
 
Protein sequence
MHTHSPIPRT ALVTGGSSGI GLAIARRLRQ QGYRIALVAR DSQRLQRAAA ELGGVPWMAA 
DLSRREAVEA VAAWFGDTFQ GLDVLVNNAG FTRKIAATTP LAEAEREWDA LLDGNLKSAF
LMSLAVLPHF AEEGGRIIHI GSIAAQTGSG SPGALGYAAA KAGLHGFGVA LARELGSRGI
TVNSVAPGYI ADTRFFPGGL DPQRVAAIVG ETPLGRTGRV EDIAAAVAWL ASPEAGFVTG
TVVSVNGGWR VGN