Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_40900 |
Symbol | |
ID | 4381049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3647850 |
End bp | 3648611 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325847 |
Product | putative short-chain dehydrogenase |
Protein accession | YP_791416 |
Protein GI | 116049777 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 62 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACTC ATTCTCCAAT CCCCCGTACC GCCCTGGTCA CCGGCGGCTC GTCGGGCATC GGCCTGGCCA TCGCCCGGCG CCTTCGGCAA CAGGGTTATC GGATCGCCCT GGTGGCCCGT GATTCCCAGC GCCTGCAACG CGCTGCCGCC GAGTTGGGCG GTGTGCCCTG GATGGCCGCC GATCTTTCCC GCCGCGAAGC TGTCGAGGCG GTGGCCGCCT GGTTTGGCGA CACCTTCCAG GGGCTCGACG TGCTGGTGAA CAACGCCGGG TTCACCCGAA AGATCGCCGC CACCACTCCG CTGGCTGAGG CCGAGCGGGA ATGGGATGCG CTGCTGGACG GCAACCTGAA AAGCGCGTTC CTCATGTCGC TGGCGGTGTT GCCGCATTTC GCGGAAGAGG GCGGGCGGAT CATCCATATC GGATCGATCG CTGCGCAGAC CGGTAGCGGC AGTCCCGGTG CGCTGGGCTA TGCGGCAGCC AAGGCCGGCC TGCATGGCTT CGGCGTGGCC CTGGCGCGGG AACTCGGTTC GCGCGGGATC ACGGTGAACA GCGTGGCACC GGGTTACATC GCCGACACCC GGTTCTTTCC CGGCGGCCTC GATCCGCAAC GGGTCGCCGC CATCGTCGGC GAGACCCCGC TGGGCAGGAC CGGCCGGGTC GAGGACATCG CCGCGGCGGT GGCCTGGCTG GCCTCGCCCG AGGCGGGGTT CGTCACCGGA ACGGTGGTGT CGGTGAACGG TGGCTGGCGG GTCGGCAACT GA
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Protein sequence | MHTHSPIPRT ALVTGGSSGI GLAIARRLRQ QGYRIALVAR DSQRLQRAAA ELGGVPWMAA DLSRREAVEA VAAWFGDTFQ GLDVLVNNAG FTRKIAATTP LAEAEREWDA LLDGNLKSAF LMSLAVLPHF AEEGGRIIHI GSIAAQTGSG SPGALGYAAA KAGLHGFGVA LARELGSRGI TVNSVAPGYI ADTRFFPGGL DPQRVAAIVG ETPLGRTGRV EDIAAAVAWL ASPEAGFVTG TVVSVNGGWR VGN
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