| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_40670 |
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| Symbol | metH |
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| ID | 4380265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3631084 |
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| End bp | 3634788 |
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| Gene Length | 3705 bp |
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| Protein Length | 1234 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639325829 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_791398 |
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| Protein GI | 116049795 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0754274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCC CGCTCACCGA TCGCAGCGCC CGCCTGCAAG CCCTCCAGCA CGCCCTCAGG
GAACGTATCC TGATCCTCGA TGGCGGCATG GGCACCATGA TCCAGAGCTA CAAGCTGGAA
GAAGCCGACT ACCGCGGCGA GCGCTTCGCC GACTGGCCGA GCGACGTGAA AGGCAACAAC
GACCTCTTGC TGCTCAGCCG CCCGGACGTG ATCCAGGCCA TCGAGAATGC CTACCTCGAC
GCCGGCGCCG ACATCCTCGA GACCAATACC TTCAACGCCA CCCAGGTGTC CCAGGCCGAC
TACGGCATGC AGTCGCTGGC CTACGAACTC AACGTCGAAG GGGCGCGCCT GGCTCGCCAG
GTGGCGGACG CGAAGACCGC CGAGACCCCG GACAAGCCGC GCTTCGTCGC CGGCGTGCTC
GGCCCGACCA GCCGCACCTG CTCGATTTCC CCGGACGTGA ACAACCCCGG CTACCGCAAC
GTCACCTTCG ACGAGCTGGT GGAGAACTAC GTCGAGGCGA CCCGCGGCCT GATCGAGGGC
GGCGCCGACC TGATCCTGAT CGAGACCATC TTCGACACCC TCAATGCCAA GGCGGCGATA
TTCGCCGTCC AGGGCGTGTT CGAGGAACTC GGCGTGGAGC TGCCGATCAT GATCTCCGGG
ACCATCACCG ACGCCTCCGG CCGCACCCTG TCGGGCCAGA CCACCGAGGC CTTCTGGAAC
TCGGTGCGGC ATGCCCGGCC GATCTCGGTA GGCCTGAACT GCGCCCTCGG CGCCAAGGAA
TTGCGGCCGT ACATCGAGGA ACTGTCGACC AAGGCCGACA CTCATGTCTC GGCCCACCCC
AACGCCGGCC TGCCGAACGC CTTCGGCGAA TACGACGAAT CGCCGGCGGA AATGGCCGTG
GTGGTCGAGG AATTCGCCGC CGCCGGCTTC CTCAATATCG TCGGCGGCTG CTGCGGCACC
ACCCCGGCGC ACATCGAGGC GATCGCCAAG GCAGTGGCCA AGTACCCGCC GCGGGCCATC
CCGGAGATTC CCCGGGCCTG TCGCCTGTCC GGCCTGGAGC CGTTCACCAT CGACCGCAGC
TCGCTGTTCG TCAACGTCGG CGAGCGCACC AACATCACCG GTTCGGCCAA GTTCGCCCGG
CTGATCCGCG AGGAAAACTA CGCGGAAGCT CTCGAGGTCG CCCAGCAGCA GGTGGAAGCC
GGCGCCCAGG TGATCGACAT CAACATGGAC GAAGGCATGC TGGACTCGAA GGCGGCCATG
GTCACCTTCC TCAACCTGAT CGCCTCCGAG CCCGACATCT CGCGCGTGCC GATCATGATC
GACTCCTCCA AGTGGGAAGT GATCGAGGCC GGCCTGAAGT GCATCCAGGG CAAGGGCATC
GTCAACTCGA TCTCGATGAA GGAAGGCGTC GAGGCCTTCA AGCACCATGC CCGCCTGTGC
AAGCGCTACG GCGCCGCGGT GGTGGTGATG GCCTTCGACG AGGACGGCCA GGCCGACACC
CAGGCGCGCA AGGAAGAAAT CTGCAAGCGC TCCTACGACA TCCTGGTCGA CGAAGTCGGC
TTCCCACCGG AAGACATCAT CTTCGATGCG AACATCTTCG CCATCGCCAC CGGCATCGAG
GAACACAACA ACTACGCGGT CGATTTCATC AACGCCTGCG CCTACATCCG CGACAACCTC
CCCTACGCCC TGAGTTCGGG CGGGGTGTCC AACGTGTCCT TCTCGTTCCG CGGCAACAAC
CCGGTACGCG AGGCGATCCA CTCGGTGTTC CTCTACTACG CGATCCGCAA CGGCCTGACC
ATGGGCATCG TCAACGCCGG CCAGCTGGAA ATCTACGACG AGATTCCGAA AGCGCTGCGC
GACCGGGTCG AGGACGTGGT GCTCAACCGC ACGCCCGAGG CCACCGAGGC CCTGCTGGCG
ATCGCCGACG ACTACAAGGG CGGCGGCGCG GTCAAGGAGG CCGAGGACGA GGAATGGCGC
AGCTACAGTG TCGAGAAGCG CCTCGAGCAT GCGCTGGTCA AGGGCATCAC CACCTGGATC
GTCGAGGACA CCGAGGAATG CCGCCAGCAG TGTGCGCGTC CCATCGAGGT CATCGAAGGT
CCGCTGATGT CCGGGATGAA CGTGGTCGGC GACCTGTTCG GCGCCGGCAA GATGTTCCTC
CCGCAGGTGG TCAAGTCCGC GCGAGTGATG AAGCAGGCGG TGGCCCACCT GATTCCCTTC
ATCGAGGCGG AGAAAGGCGA CAAGCCGGAA GCCAAGGGCA AGATCCTGAT GGCCACGGTG
AAGGGCGACG TGCACGACAT CGGCAAGAAC ATCGTCGGCG TGGTGCTCGG CTGCAACGGC
TATGACGTGG TCGACCTCGG CGTGATGGTG CCGGCGGAGA AGATCCTGCA GACCGCCATC
GCCGAGAAAT GCGACATCAT CGGCCTGTCT GGCCTGATCA CGCCGTCGCT GGACGAGATG
GTCCACGTCG CCAAGGAAAT GCAGCGGCAG AATTTCCAGT TGCCGCTGAT GATCGGCGGC
GCCACTACCT CGAAGGCGCA TACCGCGGTG AAGATCGATC CGCAGTACAG CAACGACGCG
GTGGTCTACG TCACCGACGC CTCGCGCGCG GTAGGCGTGG CCACCAGCCT GCTGTCCAAG
GAGCTGAAGG CCGACTACGT GGCCCGCACC CGCGCCGACT ACGCGGTGGT CCGCGAACGC
ACGGCCAACC GCAGCGCCCG CACCGAGCGG CTGAGCTACG AACAGGCGAT CGCCAACAAG
CCGGCGTTCG ACTGGGCCGG CTACCAGGCG CCGACGCCTT CCTTCACCGG CGTCAGGGTG
CTCGACGAGA TCGACCTCGC GGTGCTCGCC GAGTACATCG ACTGGACGCC GTTCTTCATT
TCCTGGGACC TGGCCGGCAA GTACCCGCGC ATCCTCACCG ACGAGGTGGT CGGCGAGGCC
GCCACCTCGT TGTTCAATGA CGCCCAGGCG ATGCTGAAGA AGCTGATCGA CGAGAAGCTG
ATCAAGGCCC GTGCGGTGTT CGGCTTCTGG CCGGCCAACC AGGTCGAGCA CGACGACCTG
GAGGTCTACG GCGCCGATGG CGAGACCCTC GCCACCCTGC ACCACCTGCG GCAGCAGACG
ATCAAGCCGG ACGGCAAGCC GAACCTGTCG CTGGCCGATT TCGTCGCGCC GAAGGAAAGC
GGCGTGCGCG ACTACATCGG CGGCTTCATC ACCACCGCCG GGATCGGCGC CGAGGAAGTG
GCCAAGGCGT ACGAAGCCAA GGGCGACGAC TACAACAGCA TCATGGTCAA GGCGCTCGCC
GACCGCCTCG CCGAAGCCTG CGCCGAGTGG CTGCACGAGC GGGTGCGCAA GGAGTACTGG
GGCTACGCCC GCGACGAACA CCTCGACAAC GAGGCCTTGA TCAAGGAGCA ATACGTCGGC
ATCCGCCCGG CACCGGGCTA CCCGGCCTGC CCCGACCATA CCGAGAAAGG CACTCTGTTC
GAACTGCTCG ATCCGCAGGG CCTGTCCGGC GTCAGCCTGA CCGAGCACTA CGCGATGTTC
CCGGCCGCGG CGGTCAGCGG TTGGTATTTC GCCCACCCGC AGGCGCAGTA CTTCGCGGTC
GGCAAGATCG ACAAGGACCA GGTGGAACGC TACAGCCAGC GCAAGGGCCA GGAAGCCAGC
GTCAGCGAGC GCTGGCTGGC GCCGAACCTT GGCTACGATG ACTGA
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| Protein sequence | MSSPLTDRSA RLQALQHALR ERILILDGGM GTMIQSYKLE EADYRGERFA DWPSDVKGNN
DLLLLSRPDV IQAIENAYLD AGADILETNT FNATQVSQAD YGMQSLAYEL NVEGARLARQ
VADAKTAETP DKPRFVAGVL GPTSRTCSIS PDVNNPGYRN VTFDELVENY VEATRGLIEG
GADLILIETI FDTLNAKAAI FAVQGVFEEL GVELPIMISG TITDASGRTL SGQTTEAFWN
SVRHARPISV GLNCALGAKE LRPYIEELST KADTHVSAHP NAGLPNAFGE YDESPAEMAV
VVEEFAAAGF LNIVGGCCGT TPAHIEAIAK AVAKYPPRAI PEIPRACRLS GLEPFTIDRS
SLFVNVGERT NITGSAKFAR LIREENYAEA LEVAQQQVEA GAQVIDINMD EGMLDSKAAM
VTFLNLIASE PDISRVPIMI DSSKWEVIEA GLKCIQGKGI VNSISMKEGV EAFKHHARLC
KRYGAAVVVM AFDEDGQADT QARKEEICKR SYDILVDEVG FPPEDIIFDA NIFAIATGIE
EHNNYAVDFI NACAYIRDNL PYALSSGGVS NVSFSFRGNN PVREAIHSVF LYYAIRNGLT
MGIVNAGQLE IYDEIPKALR DRVEDVVLNR TPEATEALLA IADDYKGGGA VKEAEDEEWR
SYSVEKRLEH ALVKGITTWI VEDTEECRQQ CARPIEVIEG PLMSGMNVVG DLFGAGKMFL
PQVVKSARVM KQAVAHLIPF IEAEKGDKPE AKGKILMATV KGDVHDIGKN IVGVVLGCNG
YDVVDLGVMV PAEKILQTAI AEKCDIIGLS GLITPSLDEM VHVAKEMQRQ NFQLPLMIGG
ATTSKAHTAV KIDPQYSNDA VVYVTDASRA VGVATSLLSK ELKADYVART RADYAVVRER
TANRSARTER LSYEQAIANK PAFDWAGYQA PTPSFTGVRV LDEIDLAVLA EYIDWTPFFI
SWDLAGKYPR ILTDEVVGEA ATSLFNDAQA MLKKLIDEKL IKARAVFGFW PANQVEHDDL
EVYGADGETL ATLHHLRQQT IKPDGKPNLS LADFVAPKES GVRDYIGGFI TTAGIGAEEV
AKAYEAKGDD YNSIMVKALA DRLAEACAEW LHERVRKEYW GYARDEHLDN EALIKEQYVG
IRPAPGYPAC PDHTEKGTLF ELLDPQGLSG VSLTEHYAMF PAAAVSGWYF AHPQAQYFAV
GKIDKDQVER YSQRKGQEAS VSERWLAPNL GYDD
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