Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_40670 |
Symbol | metH |
ID | 4380265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3631084 |
End bp | 3634788 |
Gene Length | 3705 bp |
Protein Length | 1234 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639325829 |
Product | B12-dependent methionine synthase |
Protein accession | YP_791398 |
Protein GI | 116049795 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0754274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAGCC CGCTCACCGA TCGCAGCGCC CGCCTGCAAG CCCTCCAGCA CGCCCTCAGG GAACGTATCC TGATCCTCGA TGGCGGCATG GGCACCATGA TCCAGAGCTA CAAGCTGGAA GAAGCCGACT ACCGCGGCGA GCGCTTCGCC GACTGGCCGA GCGACGTGAA AGGCAACAAC GACCTCTTGC TGCTCAGCCG CCCGGACGTG ATCCAGGCCA TCGAGAATGC CTACCTCGAC GCCGGCGCCG ACATCCTCGA GACCAATACC TTCAACGCCA CCCAGGTGTC CCAGGCCGAC TACGGCATGC AGTCGCTGGC CTACGAACTC AACGTCGAAG GGGCGCGCCT GGCTCGCCAG GTGGCGGACG CGAAGACCGC CGAGACCCCG GACAAGCCGC GCTTCGTCGC CGGCGTGCTC GGCCCGACCA GCCGCACCTG CTCGATTTCC CCGGACGTGA ACAACCCCGG CTACCGCAAC GTCACCTTCG ACGAGCTGGT GGAGAACTAC GTCGAGGCGA CCCGCGGCCT GATCGAGGGC GGCGCCGACC TGATCCTGAT CGAGACCATC TTCGACACCC TCAATGCCAA GGCGGCGATA TTCGCCGTCC AGGGCGTGTT CGAGGAACTC GGCGTGGAGC TGCCGATCAT GATCTCCGGG ACCATCACCG ACGCCTCCGG CCGCACCCTG TCGGGCCAGA CCACCGAGGC CTTCTGGAAC TCGGTGCGGC ATGCCCGGCC GATCTCGGTA GGCCTGAACT GCGCCCTCGG CGCCAAGGAA TTGCGGCCGT ACATCGAGGA ACTGTCGACC AAGGCCGACA CTCATGTCTC GGCCCACCCC AACGCCGGCC TGCCGAACGC CTTCGGCGAA TACGACGAAT CGCCGGCGGA AATGGCCGTG GTGGTCGAGG AATTCGCCGC CGCCGGCTTC CTCAATATCG TCGGCGGCTG CTGCGGCACC ACCCCGGCGC ACATCGAGGC GATCGCCAAG GCAGTGGCCA AGTACCCGCC GCGGGCCATC CCGGAGATTC CCCGGGCCTG TCGCCTGTCC GGCCTGGAGC CGTTCACCAT CGACCGCAGC TCGCTGTTCG TCAACGTCGG CGAGCGCACC AACATCACCG GTTCGGCCAA GTTCGCCCGG CTGATCCGCG AGGAAAACTA CGCGGAAGCT CTCGAGGTCG CCCAGCAGCA GGTGGAAGCC GGCGCCCAGG TGATCGACAT CAACATGGAC GAAGGCATGC TGGACTCGAA GGCGGCCATG GTCACCTTCC TCAACCTGAT CGCCTCCGAG CCCGACATCT CGCGCGTGCC GATCATGATC GACTCCTCCA AGTGGGAAGT GATCGAGGCC GGCCTGAAGT GCATCCAGGG CAAGGGCATC GTCAACTCGA TCTCGATGAA GGAAGGCGTC GAGGCCTTCA AGCACCATGC CCGCCTGTGC AAGCGCTACG GCGCCGCGGT GGTGGTGATG GCCTTCGACG AGGACGGCCA GGCCGACACC CAGGCGCGCA AGGAAGAAAT CTGCAAGCGC TCCTACGACA TCCTGGTCGA CGAAGTCGGC TTCCCACCGG AAGACATCAT CTTCGATGCG AACATCTTCG CCATCGCCAC CGGCATCGAG GAACACAACA ACTACGCGGT CGATTTCATC AACGCCTGCG CCTACATCCG CGACAACCTC CCCTACGCCC TGAGTTCGGG CGGGGTGTCC AACGTGTCCT TCTCGTTCCG CGGCAACAAC CCGGTACGCG AGGCGATCCA CTCGGTGTTC CTCTACTACG CGATCCGCAA CGGCCTGACC ATGGGCATCG TCAACGCCGG CCAGCTGGAA ATCTACGACG AGATTCCGAA AGCGCTGCGC GACCGGGTCG AGGACGTGGT GCTCAACCGC ACGCCCGAGG CCACCGAGGC CCTGCTGGCG ATCGCCGACG ACTACAAGGG CGGCGGCGCG GTCAAGGAGG CCGAGGACGA GGAATGGCGC AGCTACAGTG TCGAGAAGCG CCTCGAGCAT GCGCTGGTCA AGGGCATCAC CACCTGGATC GTCGAGGACA CCGAGGAATG CCGCCAGCAG TGTGCGCGTC CCATCGAGGT CATCGAAGGT CCGCTGATGT CCGGGATGAA CGTGGTCGGC GACCTGTTCG GCGCCGGCAA GATGTTCCTC CCGCAGGTGG TCAAGTCCGC GCGAGTGATG AAGCAGGCGG TGGCCCACCT GATTCCCTTC ATCGAGGCGG AGAAAGGCGA CAAGCCGGAA GCCAAGGGCA AGATCCTGAT GGCCACGGTG AAGGGCGACG TGCACGACAT CGGCAAGAAC ATCGTCGGCG TGGTGCTCGG CTGCAACGGC TATGACGTGG TCGACCTCGG CGTGATGGTG CCGGCGGAGA AGATCCTGCA GACCGCCATC GCCGAGAAAT GCGACATCAT CGGCCTGTCT GGCCTGATCA CGCCGTCGCT GGACGAGATG GTCCACGTCG CCAAGGAAAT GCAGCGGCAG AATTTCCAGT TGCCGCTGAT GATCGGCGGC GCCACTACCT CGAAGGCGCA TACCGCGGTG AAGATCGATC CGCAGTACAG CAACGACGCG GTGGTCTACG TCACCGACGC CTCGCGCGCG GTAGGCGTGG CCACCAGCCT GCTGTCCAAG GAGCTGAAGG CCGACTACGT GGCCCGCACC CGCGCCGACT ACGCGGTGGT CCGCGAACGC ACGGCCAACC GCAGCGCCCG CACCGAGCGG CTGAGCTACG AACAGGCGAT CGCCAACAAG CCGGCGTTCG ACTGGGCCGG CTACCAGGCG CCGACGCCTT CCTTCACCGG CGTCAGGGTG CTCGACGAGA TCGACCTCGC GGTGCTCGCC GAGTACATCG ACTGGACGCC GTTCTTCATT TCCTGGGACC TGGCCGGCAA GTACCCGCGC ATCCTCACCG ACGAGGTGGT CGGCGAGGCC GCCACCTCGT TGTTCAATGA CGCCCAGGCG ATGCTGAAGA AGCTGATCGA CGAGAAGCTG ATCAAGGCCC GTGCGGTGTT CGGCTTCTGG CCGGCCAACC AGGTCGAGCA CGACGACCTG GAGGTCTACG GCGCCGATGG CGAGACCCTC GCCACCCTGC ACCACCTGCG GCAGCAGACG ATCAAGCCGG ACGGCAAGCC GAACCTGTCG CTGGCCGATT TCGTCGCGCC GAAGGAAAGC GGCGTGCGCG ACTACATCGG CGGCTTCATC ACCACCGCCG GGATCGGCGC CGAGGAAGTG GCCAAGGCGT ACGAAGCCAA GGGCGACGAC TACAACAGCA TCATGGTCAA GGCGCTCGCC GACCGCCTCG CCGAAGCCTG CGCCGAGTGG CTGCACGAGC GGGTGCGCAA GGAGTACTGG GGCTACGCCC GCGACGAACA CCTCGACAAC GAGGCCTTGA TCAAGGAGCA ATACGTCGGC ATCCGCCCGG CACCGGGCTA CCCGGCCTGC CCCGACCATA CCGAGAAAGG CACTCTGTTC GAACTGCTCG ATCCGCAGGG CCTGTCCGGC GTCAGCCTGA CCGAGCACTA CGCGATGTTC CCGGCCGCGG CGGTCAGCGG TTGGTATTTC GCCCACCCGC AGGCGCAGTA CTTCGCGGTC GGCAAGATCG ACAAGGACCA GGTGGAACGC TACAGCCAGC GCAAGGGCCA GGAAGCCAGC GTCAGCGAGC GCTGGCTGGC GCCGAACCTT GGCTACGATG ACTGA
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Protein sequence | MSSPLTDRSA RLQALQHALR ERILILDGGM GTMIQSYKLE EADYRGERFA DWPSDVKGNN DLLLLSRPDV IQAIENAYLD AGADILETNT FNATQVSQAD YGMQSLAYEL NVEGARLARQ VADAKTAETP DKPRFVAGVL GPTSRTCSIS PDVNNPGYRN VTFDELVENY VEATRGLIEG GADLILIETI FDTLNAKAAI FAVQGVFEEL GVELPIMISG TITDASGRTL SGQTTEAFWN SVRHARPISV GLNCALGAKE LRPYIEELST KADTHVSAHP NAGLPNAFGE YDESPAEMAV VVEEFAAAGF LNIVGGCCGT TPAHIEAIAK AVAKYPPRAI PEIPRACRLS GLEPFTIDRS SLFVNVGERT NITGSAKFAR LIREENYAEA LEVAQQQVEA GAQVIDINMD EGMLDSKAAM VTFLNLIASE PDISRVPIMI DSSKWEVIEA GLKCIQGKGI VNSISMKEGV EAFKHHARLC KRYGAAVVVM AFDEDGQADT QARKEEICKR SYDILVDEVG FPPEDIIFDA NIFAIATGIE EHNNYAVDFI NACAYIRDNL PYALSSGGVS NVSFSFRGNN PVREAIHSVF LYYAIRNGLT MGIVNAGQLE IYDEIPKALR DRVEDVVLNR TPEATEALLA IADDYKGGGA VKEAEDEEWR SYSVEKRLEH ALVKGITTWI VEDTEECRQQ CARPIEVIEG PLMSGMNVVG DLFGAGKMFL PQVVKSARVM KQAVAHLIPF IEAEKGDKPE AKGKILMATV KGDVHDIGKN IVGVVLGCNG YDVVDLGVMV PAEKILQTAI AEKCDIIGLS GLITPSLDEM VHVAKEMQRQ NFQLPLMIGG ATTSKAHTAV KIDPQYSNDA VVYVTDASRA VGVATSLLSK ELKADYVART RADYAVVRER TANRSARTER LSYEQAIANK PAFDWAGYQA PTPSFTGVRV LDEIDLAVLA EYIDWTPFFI SWDLAGKYPR ILTDEVVGEA ATSLFNDAQA MLKKLIDEKL IKARAVFGFW PANQVEHDDL EVYGADGETL ATLHHLRQQT IKPDGKPNLS LADFVAPKES GVRDYIGGFI TTAGIGAEEV AKAYEAKGDD YNSIMVKALA DRLAEACAEW LHERVRKEYW GYARDEHLDN EALIKEQYVG IRPAPGYPAC PDHTEKGTLF ELLDPQGLSG VSLTEHYAMF PAAAVSGWYF AHPQAQYFAV GKIDKDQVER YSQRKGQEAS VSERWLAPNL GYDD
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