Gene PA14_40540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_40540 
Symbol 
ID4385884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3619855 
End bp3621012 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content69% 
IMG OID639325818 
ProductCBS domain-containing protein 
Protein accessionYP_791387 
Protein GI116049806 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACT CCCCCAGCAC CGCCGTACGC ACCTGGCTGA AAGGCTTCCG CCCCCTGACC 
CTGAACGCTC GACCGCGCGA CTGCCTGCGC GCCGGACTCG GTGCCTGCAT CGGCGCGCTC
GCCGCGGTAT TCGCCTGCCA GGCGTTGTTC GGCAGCGAAC TGGCGCTGCG CCTGGCAGCG
CCGCTCGGCG CATCCGCCGT ACTACTGTTC GCCCTCGCCT CCAGCCCCCT GGCGCAACCC
TGGTCGATGC TCGGCGGCAA CCTGGTCGCC GCCCTGGCCG GCGGCCTCAG CGCCTACTGG
TTCGGGCACG AACTGGCCCC GGCCCTGGTC GGCATGGCCC TCGGCATGCT GCTGATGTTC
GCCCTGCGCT GCCTGCATCC GCCGAGCTGC GCGCTGGCCC TGAGCGTGGC CCTCAACCCG
TCCCTGAGCG AACTCGGCAT CGACGTGGTC TGGCCGATCC TGCTCTCCAC CCTGGTGCTG
ATCGGCTGCG CGCTGCTCTA CAACAACCTG ATGCGCTCTC CCTACCCGCG CCCCTACCAG
CCGCCGCGGG CCAATCTCCA TGGCACCCGC GACCTGGCGC CGAGCGCGCG AACGGACTTC
TCCGCCCGGG ACCTGGACCA GGCGCTGCAA GACTTCGGCG AATACGTCGA CATCACCCGC
GACGACCTCG AGCGACTGAT CCACCACACC GAGCGCTACG CCTTGCGCCG GCGCATGGGC
GAGCTGACCG CGGCACGGAT CATGTCCCGC GACGTGCAGA CCGCCAGCAC CGAGACCTTC
ATCGACGACG CCTGGAAGCA GTTGCAGGAC CACCGCCTGA AGGCCCTGCC GGTGCTCGAC
GAGCATCGGC GGCTGGCCGG CATCGTCACC CAGAGCGACC TGCTCAAGCA CTTCCGCCCC
GACGGCAGCC CGTTCAAGCG CCTGCGCTTC CTGCGCGGGA CCAAGCTGAA GACGATCATG
ACCACCCCGG TGGTCTGCGT ACAGGCCGAC ACCCACGCCG TCGAGCTGGT CTCGCTGCTA
TCCGACGAAG GCCTGCACTG CCTGCCGGTG CTCAACGAAG CTGGCTACCT GGTCGGCATC
GTCAGCCAGA CCGACCTGAT CGCCGCGCTC TACCGCAACT GGCTGCAGCA CCTGGGCCAG
GCCGATCAGA TCACGTAG
 
Protein sequence
MNDSPSTAVR TWLKGFRPLT LNARPRDCLR AGLGACIGAL AAVFACQALF GSELALRLAA 
PLGASAVLLF ALASSPLAQP WSMLGGNLVA ALAGGLSAYW FGHELAPALV GMALGMLLMF
ALRCLHPPSC ALALSVALNP SLSELGIDVV WPILLSTLVL IGCALLYNNL MRSPYPRPYQ
PPRANLHGTR DLAPSARTDF SARDLDQALQ DFGEYVDITR DDLERLIHHT ERYALRRRMG
ELTAARIMSR DVQTASTETF IDDAWKQLQD HRLKALPVLD EHRRLAGIVT QSDLLKHFRP
DGSPFKRLRF LRGTKLKTIM TTPVVCVQAD THAVELVSLL SDEGLHCLPV LNEAGYLVGI
VSQTDLIAAL YRNWLQHLGQ ADQIT