| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_40240 |
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| Symbol | |
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| ID | 4382366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3585132 |
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| End bp | 3587303 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639325794 |
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| Product | putative ATP-binding/permease fusion ABC transporter |
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| Protein accession | YP_791363 |
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| Protein GI | 116049830 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.587032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCTG AGAAAACCCC GGATAACGTC GTGATCCTCA ACCACGACCC CATCGTCGAC
CCGTTGCGCC AGGGCCTGCT GCTGCTCTGC CGGCAGCTCG GCCGGCCACT CGGCGACGCC
GAACTGGTGG ACGGCATGCC GCTGGAGCAC GGTCGCCTGC CGTTGCACCT GGTGGCCCGC
GCGTTGCGCC GCGCCGACAT CACCGCCCAG GTCACGCGCC AGCCGTTGCG CCGGATCGAC
CGCTACCTGC TGCCGGCCCT GCTGCTGCTC GACGACGGCC GCGCCCTGGT GCTGGTGGGC
AACGACGGCG AGCACGCCGA GGTGCTGGTG CCGCAGAGCG ACGGCGGAAG CCAGAGGATG
CCGCTGGCCG AGCTGGAAGC GCTGTACAGC GGCACGGCGA TCTTCGCCAA GTGTCGCTAC
CGGCCGGACG GGCGGGTCGG CGACTACGCC AGCGCCTTGC CCGAGCACTG GTTCTTCGGC
CCGCTCAAGC GGCTCTGGCG TTCCTACGCC GAGGTCACCG CCGCGGCGCT GGTGGCCAAC
GTCCTGGCGG TCGCCTCGGC ACTGTTCGCC ATGCAGGTCT ACGACCGCGT GGTACCCAAC
GCGGCGTTCG ACACCCTGTG GATCCTCGCC AGCGGCGTGG CCCTGGCGAT CATCCTCGAC
GGGGTCCTGC GGATCATGCG CGGCCACCTG CTCAACGTGC TCGGCAAGCG CCTCGACCTG
CAACTCTCGA CCCTGCTGTT CTCCCGCGTG CTGAGCACCC GGGTCGCCGC CAAGCCGGCG
TCGATGGGCG CCTTCAGTAC CCAGGTGCGG GAGTTCGAGT CGGTGCGCGA GTTCTTTACC
TCGTCCAGCG CGGCGCTGAT CAGCGACCTG CCGTTCGTGG CGATCTTCCT GCTGATCATC
GCCGTGATCG GCGGCCATGT GGTCTGGGTG CCGCTGGTGG CCTGCGTGCT GATGATCCTG
CCGGGGCTGC TGACCCAGCG CCTGCTCGGC CACCTGTCGC GGCAGAACCT GCGCGAAGGG
GCGATGAAGA ACGGCGTGCT GCTGGAAGCC TTCGAGCACC TGGAGACGGT CAAGGCGACT
CGCGCCGAAG GCCGCTGCCT GCACCAGTGG GAAACCCTGA CCGGCGAACT GGCCGGCACG
GCGATGAAAA CCCATACCCT GGCCTCGACC CTGAGCTACT CGGCGAGCAT CGTCCAGCAG
CTCTGCTACG TCGGCGTGGT GGTCTTCGGC GTCTATCGGA TCAGCGAGGG CGCGATGACC
GTCGGCGGCC TGGTGGCCTG CTCGATCCTC GCCTCGCGGG CCATCGCACC GCTGTCGCAG
GCGGCCGGCA TCCTCGGTCG CTGGCAGCAC ACCAAGGTGG CGATGGAAGG CCTTGATCAA
CTGATGAGCG CCGAGCAGGA GCGCCCCCAG GGCAAGCGCT TCGTGCACAA GGAGCGCCTG
CAGGGACATT ACCGCCTGGA GGGCGTGCGC CTGGCCCACG GCGACAGCCC GCCGGTGGTC
GACGTGCAGG CCCTGAACAT CCGCGCTGGC GAGCGGGTGG CGCTGCTCGG CGGCAACGGC
GCCGGCAAGT CGACCCTGCT GCGCCTGCTC AGCGGCCTGC TCGACGCGCA GGCGGGACGC
CTGCTGCTGG ACGACGTCAG CCTGACCCAG ATCGACCCAG CCGACCGCCA GCGCGGTATC
GGCTACCTGC CGCAGGACGT GGCGCTGTTC CATGGCAGCC TGCGCGACAA CCTCAACCTG
GAGAACGCCG CGCTGGGCGA CGAGGAACTG CTGGAGACCC TCGACGGGGT CGGCCTGGGC
GCCTTCGTCC GCGGCCACCC GCTGGGGCTG GACATGCCGA TCCAGGGCAA TGCCAGCCTG
TCCGGCGGCC AGCGCCAGGC CGTCGGGCTG GCCCGGGTGC TGCTACAGGA CCCTCCGATC
CTGCTGCTCG ACGAGCCGAC CGCGGCCTTC GACCAGGGCA GCGAGAAACA GGTCATCGAC
TACCTGCAGC AATGGTTGGG CAAGCGCACC CTGGTCATCA CCACCCACAA GAAAAGCATG
CTCGCCCTGG TCGAGCGTGC GGTGGTCCTG CGCCAGGGCA GGGTGATCAT GGACGGCCCG
CTGGAGCAGG TGGTGCAGGG CAACCAGGTA CAGGCACCGC AGGCCGCCGA AGGAGGCAAC
CATGGACTCT GA
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| Protein sequence | MEAEKTPDNV VILNHDPIVD PLRQGLLLLC RQLGRPLGDA ELVDGMPLEH GRLPLHLVAR
ALRRADITAQ VTRQPLRRID RYLLPALLLL DDGRALVLVG NDGEHAEVLV PQSDGGSQRM
PLAELEALYS GTAIFAKCRY RPDGRVGDYA SALPEHWFFG PLKRLWRSYA EVTAAALVAN
VLAVASALFA MQVYDRVVPN AAFDTLWILA SGVALAIILD GVLRIMRGHL LNVLGKRLDL
QLSTLLFSRV LSTRVAAKPA SMGAFSTQVR EFESVREFFT SSSAALISDL PFVAIFLLII
AVIGGHVVWV PLVACVLMIL PGLLTQRLLG HLSRQNLREG AMKNGVLLEA FEHLETVKAT
RAEGRCLHQW ETLTGELAGT AMKTHTLAST LSYSASIVQQ LCYVGVVVFG VYRISEGAMT
VGGLVACSIL ASRAIAPLSQ AAGILGRWQH TKVAMEGLDQ LMSAEQERPQ GKRFVHKERL
QGHYRLEGVR LAHGDSPPVV DVQALNIRAG ERVALLGGNG AGKSTLLRLL SGLLDAQAGR
LLLDDVSLTQ IDPADRQRGI GYLPQDVALF HGSLRDNLNL ENAALGDEEL LETLDGVGLG
AFVRGHPLGL DMPIQGNASL SGGQRQAVGL ARVLLQDPPI LLLDEPTAAF DQGSEKQVID
YLQQWLGKRT LVITTHKKSM LALVERAVVL RQGRVIMDGP LEQVVQGNQV QAPQAAEGGN
HGL
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