| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_40230 |
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| Symbol | |
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| ID | 4382367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | - |
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| Start bp | 3583955 |
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| End bp | 3585142 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639325793 |
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| Product | putative secretion protein |
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| Protein accession | YP_791362 |
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| Protein GI | 116049831 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.975175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCTG AACGCGACGC CGCCGCCCTG CGCCGGCAAC TGGCCGACCC GTTGCTGGCG
GCTACCCACC CGGTCTACCG GCCGCTGCTC TGGACCCTGC TCGGTTGCGT GCTGCTGTTC
ATCGGCTGGG CGGCCTGGGC GCAACTGGAC GAGGTGACCC GCGGCGACGG CCGGGTCGTG
CCGTTCAGTC GCATCCAGAA GATCCAGAGC CTGGAGGGCG GCATCCTCGA CCGCCTGCTG
GTGAAGGAGG GCGACCTGGT GGAAGTCGGC CAGCCGCTGG TGCGCCTCGA CGAGACGCGC
TTCCTCACCA ACTTCCAGGA GTCGGCGAAC CAGGCCAGCG TGCTGCGCGC GGCCATTGCC
CGGCTCGACG CCGAGGTGCT CGGCAAGAAG AGCATCGAGT TCCCGCCGGA CGTCGATCCC
GAGGGGCCGC TGGCGCGTTC CGAACGCGAG CTGTTCAAGT CGCGCCGCGA CAAACTGGTG
GAGGGCACCC AGGCGATCCA GCGGCAGATC CACCTGGCGC AGAGCCAGCT CGACCTGGTT
CGCCCGCTGG TGGCCAAGCG TGCGGTGAGC CAGATGGAGG CGCTCAAGCT GAGCCAGGAC
ATCGCCACCC TCAGCGGCAA GCTGACCGAG CTGAAAAGCA CCTATTTCCA GGATGCCTAT
ACCGAGCGCG CCCAGCGCAA GGCCGATCTC AGCGCCCTGG AACCGATCGT CCAGCAGCGC
CAGGACCAGT TGCGCCGCAC CGAGATCCTG TCGCCGGTGC GCGGGCGGGT GAACACCGTG
CTGATCAACA CCCGCGGCGG GGTGATCCAG CCCGGCGAGC CGATCATGGA AGTGATCCCG
GTAGAGGAGC GCCTGCTGGT GGAGGCGAAG ATCAAGCCGC GCGACGTGGC CTTCCTGGTT
CCCGGCATGC CGGCCAAGGT GAAGATCACC GCCTACGACT ACACCATCTA CGGCGACCTC
AAGGGCACCC TGGAGCAGAT CAGCGCCGAC ACCATCGAGG AGGACACCCC GCATGGCAAG
GAGTCCTACT ACCAGGTGCT GATCAAGACC GATGGCAGCC AACTGAAGCG CGGCGAGGAG
GTATTGCCGA TCATTCCGGG GATGGTCGCC GAGGTGGACA TCCTCAGCGG CAAGCGCAGC
GTGCTCAACT ACCTGCTGCG GCCGCTGATC AAGGCGCGCC TTTACTGA
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| Protein sequence | MDSERDAAAL RRQLADPLLA ATHPVYRPLL WTLLGCVLLF IGWAAWAQLD EVTRGDGRVV
PFSRIQKIQS LEGGILDRLL VKEGDLVEVG QPLVRLDETR FLTNFQESAN QASVLRAAIA
RLDAEVLGKK SIEFPPDVDP EGPLARSERE LFKSRRDKLV EGTQAIQRQI HLAQSQLDLV
RPLVAKRAVS QMEALKLSQD IATLSGKLTE LKSTYFQDAY TERAQRKADL SALEPIVQQR
QDQLRRTEIL SPVRGRVNTV LINTRGGVIQ PGEPIMEVIP VEERLLVEAK IKPRDVAFLV
PGMPAKVKIT AYDYTIYGDL KGTLEQISAD TIEEDTPHGK ESYYQVLIKT DGSQLKRGEE
VLPIIPGMVA EVDILSGKRS VLNYLLRPLI KARLY
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