| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_40200 |
|---|
| Symbol | |
|---|
| ID | 4382370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3580273 |
|---|
| End bp | 3582468 |
|---|
| Gene Length | 2196 bp |
|---|
| Protein Length | 731 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639325790 |
|---|
| Product | putative oxidoreductase |
|---|
| Protein accession | YP_791359 |
|---|
| Protein GI | 116049834 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.491411 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCA AGATCGATCT GAGCAACGCC CTGCCCGGCT CGCGCCGCGG CTTCCTCAAA
GGCGCCGCGG TGGTCGGCCT GACCATCGGC TTCCAGTGGA GCGGAGCCCG GCGCGCCCTC
GCCGCGGCCC TGCCGGACGC CGGCTTCGCG CCCAACGCCT TCCTGCGGAT CGCCCCGGAC
GACAGTGTCA CGGTGATCGC CAAGCACGTG GAGATGGGCC AGGGCGCCTA TACCGGTATC
GCCACCATCG TCGCCGAGGA ACTCGACGCG GACTGGAGCA AGGTCCGCGT GGAAAGCGCG
CCCGCCGACG CCAAGCGCTA CGCCAACCTG GCCTTCGGCA CCATGCAGGG CACCGGCGGC
AGTTCGGCGA TGGCCAACTC CTGGATGCAA TTGCGCGAGG CCGGGGCCAA GGCGCGCGCG
ATGCTGGTCG AGGCCGCCGC CCGCCAGTGG CAGGTACCAG CCGCCGAACT GCGTACCCGC
GACGGCTTCG TCGAACATCC GACCAGCCAG CGCAAGGCCA GCTACGGTTC GCTGGCCGCT
GCGGCGGCGG AACTGCCGGT GCCGGAAAAC GTGCAATTGA AGGATCCCAA GGACTTCCGC
CTGATCGGTC ACCAGGCGCC GCGCGTCGAC GTTCCCGGCA AGACCGACGG CAGTGCGCAA
TTCACCCTCG ACGTCAGCCT GCCCGGCATG CTGGTCGCCC TGCTCCAGCG CCCGCCGCTG
TTCGGCGCTA CGGTGAAATC GTTCGACGCC ACGGCGACCA GGGCGATTCC GGGGGTGGTC
GAGGTGGTCC AGGTGCCGCA CGGCGTGGCG GTGGTCGCCA AGGGCTTCTG GGCGGCGAAG
CAAGGCCGCG ACGCGCTCAA GGTCGAGTGG GACGAGAGCA AGGCCGAGAA GCGTGGTTCC
GAGGCGCTGA TGGCGGAGTA CCGCAAGCTC GCCGAGCAAC CCGGCAAGCC CGCGCGCAGG
GACGGCGACG CCGCCAAGGC GGTGGCCGGG GCGACCCGCA GGATCGCCGC CAGCTACGAG
TTCCCGTTCC TCGCCCATGC GCCGATGGAG CCGCTGGACG CGGTGGTCAG GCTGACCGCC
GACAGCTGCG AGATCTGGGC CGGCGACCAA TTCCAGACCG TCGACCAGGG CAACGCGGCG
CGCACCGCCG GGCTGAAGCC GGAGCAGGTG AAGATCAATA CGCTCTACGC CGGCGGCAGC
TTCGGCCGGC GCGCCAACGC CTGGTCGGAC TATATCGTCG AGGCGGTATC GATCGCCAAG
GCGCTGGGCG CCAACGGCGT GCCGGTGAAG CTGCAATGGA CCCGCGAGGA CGACATCCAC
GGCGGCTTCT ACCGGCCGAT GTACTACCAC CGGCTCGAAG CCGGGCTCGA CGCCGACGGC
AAGCTGGTCG GCTGGCAACA TCGCATCGTC GGCCAGTCGA TCCTGGAAGG CACGCCGTTC
GCCGCGGTGA TGGTCAAGGA CGGCGTCGAC GCCACCTCGG TGGAAGGCGC CGCCAACCTG
CCCTATGCGG TGCCCAATGT CTCGGTCGAG CTGAGCACCA CCCAGGTCGG TGTACCGGTC
CTGTGGTGGC GGGTGGTCGG CAGCTCGCAC ACGGTCTACG CGGTGGAAGC GTTCATCGAC
GAGGCCGCGC AGGCCGCCGG CAAGGACCCC TACCTGTTCC GCCGCGACCT GCTGGCAGAG
CAGCCGCGCC TGCGCGGCGT GCTCGAACTG GCTGCGGAAA AGGCCGGCTG GGACCCGTCC
AGGCCGCTGC CCGCCGGGCG CGGGCGCGGG ATCGCGGTGA CCGAGGCATT CAAGACCTTC
GTCGCCCAGG TGGTCGAGGT CTCGGTGGAC AAGGACGGCA AGCTGAAGGT CGAGCGGGTG
GTCTGTGCGG TGGACTGCGG CATCCCGATC AACCCGGACG TGATCGCCGC GCAGATGGAG
GGCGGCATCG GCTTCGGCCT CGGCGCGATC CTGCACAGCG CGATCACCCT GAAGGACGGC
AAGGTCGAGC AGAACAACTT CGACGGCTAC CAGGTGCTGC GGATCGCCGA GATGCCCAAG
GTCGAAGTGC ACATCGTGCC CTCCGGCGAA GCGCCCACCG GGGTCGGCGA ACCCGGTGTG
GCGCCCATCG GCCCGGCGCT GGCCAATGCG ATCTTCGCCG CCACCGGGCA ACGCCTGTAC
AACCTGCCCT TCCCCACCTC CTTCGCCAAG GCCTGA
|
|---|
| Protein sequence | MNSKIDLSNA LPGSRRGFLK GAAVVGLTIG FQWSGARRAL AAALPDAGFA PNAFLRIAPD
DSVTVIAKHV EMGQGAYTGI ATIVAEELDA DWSKVRVESA PADAKRYANL AFGTMQGTGG
SSAMANSWMQ LREAGAKARA MLVEAAARQW QVPAAELRTR DGFVEHPTSQ RKASYGSLAA
AAAELPVPEN VQLKDPKDFR LIGHQAPRVD VPGKTDGSAQ FTLDVSLPGM LVALLQRPPL
FGATVKSFDA TATRAIPGVV EVVQVPHGVA VVAKGFWAAK QGRDALKVEW DESKAEKRGS
EALMAEYRKL AEQPGKPARR DGDAAKAVAG ATRRIAASYE FPFLAHAPME PLDAVVRLTA
DSCEIWAGDQ FQTVDQGNAA RTAGLKPEQV KINTLYAGGS FGRRANAWSD YIVEAVSIAK
ALGANGVPVK LQWTREDDIH GGFYRPMYYH RLEAGLDADG KLVGWQHRIV GQSILEGTPF
AAVMVKDGVD ATSVEGAANL PYAVPNVSVE LSTTQVGVPV LWWRVVGSSH TVYAVEAFID
EAAQAAGKDP YLFRRDLLAE QPRLRGVLEL AAEKAGWDPS RPLPAGRGRG IAVTEAFKTF
VAQVVEVSVD KDGKLKVERV VCAVDCGIPI NPDVIAAQME GGIGFGLGAI LHSAITLKDG
KVEQNNFDGY QVLRIAEMPK VEVHIVPSGE APTGVGEPGV APIGPALANA IFAATGQRLY
NLPFPTSFAK A
|
|---|
| |