Gene PA14_39810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_39810 
Symbol 
ID4380235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3546906 
End bp3547856 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content74% 
IMG OID639325759 
Productputative transmembrane sensor 
Protein accessionYP_791328 
Protein GI116049863 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCG CGGGCGAAGG CCGGATTCCC TCGCCGATCC TCGACGAGGC CGCCGAGTGG 
CTGGTGCGCC TGCAGGACAG CGGCTGCACC GACGACACGC GCCAGGCCTG CGCCCAGTGG
CGGCAGCGCA GCCCACAGCA CGCCCATGCC TGGGAGCGCG CCGAGCGCCT GCTGCAATGC
CTCGGCCGAC TGCCGCCGGC GCTGGCCCTG CCGACCCTCG GCCGCGAGCG CGGGCTGGAC
CGGCGGCGCG CGATCAAGCA CCTCGCCCTG GTCCTCGGCG GCGCCTCGCT GGGGCTCGCC
ACCTGGCAGG CCGAGCCGTT GCGCGACTGG CTGGCCGACC AGCGCACCGG CGTCGGCGAA
CAGCGCCGCC TGACCCTGCC CGACGGCAGC CTGCTGACCC TGAACACCGA CAGCGCCGTG
GACCTGGCCT TCGACGCCAG CCAGCGGCTG GTACGCCTGC TGCGCGGCGA GATCTTCGTC
GATAGCCGCG CCGACCCGCG TCCGTTCCGC GTCGCCACCG CCGAAGCGCG GCTGCATGCC
GGTGCCGCCC GCTTCAACGT ACGCCAGGAG ATGGCCGCGA CCCGGGTCGC GGTACTCGCC
GGGCGGGTCG AACTGAGCCC GCTCCACGGA CGCGGGCGCT GGCTGGAAAG CGGCGAGTCG
GTGCGCCTGG GCGCCGACGG CGAAGCGCGC CGGCTGGCCT TCGACGGCCT GCCGGACGCC
TGGACCCGCG GCATGCTGAT GGCCGACCGG ATGCCGCTGG CCGAGGTGCT CGCCGAACTC
GCCCGCTACC GTCGCGGCTT ACTGCGCTGC GACCCGCAAC TGGCCAGGCT GGCGGTGTCG
GGCGCCTATC CGCTGCTGGA CCTGCGGCGC ACGCTGGGCA TGCTGCAGGC CACCTATCCG
CTGAAGGTGC GCGGGGTGAC CGACTACTGG ATCAGCCTGG TGCCGGCGTG A
 
Protein sequence
MNSAGEGRIP SPILDEAAEW LVRLQDSGCT DDTRQACAQW RQRSPQHAHA WERAERLLQC 
LGRLPPALAL PTLGRERGLD RRRAIKHLAL VLGGASLGLA TWQAEPLRDW LADQRTGVGE
QRRLTLPDGS LLTLNTDSAV DLAFDASQRL VRLLRGEIFV DSRADPRPFR VATAEARLHA
GAARFNVRQE MAATRVAVLA GRVELSPLHG RGRWLESGES VRLGADGEAR RLAFDGLPDA
WTRGMLMADR MPLAEVLAEL ARYRRGLLRC DPQLARLAVS GAYPLLDLRR TLGMLQATYP
LKVRGVTDYW ISLVPA