Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_39800 |
Symbol | |
ID | 4380236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3546403 |
End bp | 3546909 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639325758 |
Product | ECF subfamily RNA polymerase sigma-70 factor |
Protein accession | YP_791327 |
Protein GI | 116049864 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCCGG CCGACGCCTC CCTGCACGAC GCTGTGAGCC ATCTCTATCA GGACCACCAT GGCTGGCTGC AAGGCTGGTT GCGGCGACGC CTGGGCTGCG CGGAAAACGC CGCCGACCTG GCCCAGGACA CCTTCGCCCG CCTGCTCGCC TCGCGCCGGG TACTGGATGC GCGCGAACCG CGCGCCTACC TGACCACCGT CGCCAAGGGG CTGATGATCA ACTGGTTCCA GCGCCAGTCG CTGGAGCGCG CCTACCTCGA TGCCCTGGCC AACCTCCCGG AAGACCTCGC GCCGCCGCCG GAACAGCGGT TGATGGTGCT GGAAACCCTG CATGAAGTAG ACGCCCTGCT CGGCAGCCTG CCGGACAGGG TCCGCCAGGC GTTTCTCCTG GCGCAGATCG AAGGCCTGAA GTACGAAGCC ATCGCCGAGC GCCTGGGCGT GTCCCTGGGC TCGGTCAAGC GCTACATGCA GCAGGCCTTC CGCCAGTGCC TGGAGCTGAT GGAATGA
|
Protein sequence | MPPADASLHD AVSHLYQDHH GWLQGWLRRR LGCAENAADL AQDTFARLLA SRRVLDAREP RAYLTTVAKG LMINWFQRQS LERAYLDALA NLPEDLAPPP EQRLMVLETL HEVDALLGSL PDRVRQAFLL AQIEGLKYEA IAERLGVSLG SVKRYMQQAF RQCLELME
|
| |