Gene PA14_39720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_39720 
Symbol 
ID4380242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3539082 
End bp3540482 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content70% 
IMG OID639325752 
Productputative amino acid oxidase 
Protein accessionYP_791321 
Protein GI116049870 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCA CGCTCACCCC TCCCCTGACC CCCAGCCACT GGATGCGCTC GACCGACCTG 
GCCGACGCCG CCAGCGCCCC CCTCGTCGGC ACCCACTCGG CAGACGTGGC GATAGTCGGC
GGCGGTTTCG TCGGGCTCTG GACCGCCATC ACCCTCAAGC AACTGGAGCC GGACGCACGG
GTCCTGCTGC TGGAGCAGGA CGTCTGCGGC GGCGGCGCTT CCGGCAGGAA CGGTGGTTTC
GTGATGTCCT GGTGGCCGAA GATCGGCACC TTGCTGGGCT TCTGCAACGA GGCGCAGGCG
CGCTTCCTTG GCGAAAGCGC GGAGCGGGCG ATCCAGGAAC TCGGGGAGTT CTGCGCGCGG
CATGACATCG ATGCGCACTT CCAGCAGAAG GGCTGGCTGT GGACCGCCAC CACGGCGCAC
CACCTCGACG CCTGGAACGA TACCCTCGCC GCCTGCGAAC GGCTCGGCGT CAGTCCCTTC
GAACGCCTCG ACGCCAGCGA AGTGGCACGC CGGACCGGTT CGCCGGTGCA TCTCGCCGGG
GTCTTCGAGC GCAGCAATGC CACCGTGCAA CCAGCCTTGC TGGTGCAAGG CATGCGCCGC
GTAGCGCTGG CCCTCGGCGT GGAAATCCAC GAGCGCTGTG GCGTCAGCCA GATCGTTCCC
GGCCAGCCGG CACAGCTGCT GAGCGCCGGG GCCCGGGTCC AGGCCAAGGC GGTGGTTCTC
GCGACCAACG CCTGGTCGGC CGCCCTGCCC AGGCTCTCCA GGCTGATCGT GCCGGTGAAC
AGTTCCATCG CGGTTACCGA GGCGATACCG CAACGGCTGG AGCGAATCGG CTGGACCGGC
GGGGAAGCCA TCACCGATTC CCAACTGATG GTGGACTACT ACCGCACCAC CCGCGACGGG
CGCATCGCCT TCGGCAAGGG CACCGGCGCC ATCAGCTACG GCTCGCGCAT CGGCCGGGTA
TTCGACGTCG ACCGGGAGAG CCTGGCCCTG ACCGAGGCCG ACTTCCGCCG CACCTATCCC
TCGCTAGGCG ACATCCCGCT GGTCGACGGC TGGTCCGGCC CCATCGACCG TACCTACGAC
AGCCTGCCGG TCTTCGGCCA CCTGCACGAG AACATCCACT ACGGCATCGG CTGGAGCGGC
AACGGCGTGG GACCGAGCCG CCTGGGCGGG CGGATCCTCG CCAGCCTCGC CCTCGGCCGC
GACGACCCGT GGAGCCGTTG TCCGCTGGTA GAACGCCGCT GCCGGAGCTT CCCCCCCGAG
CCGCTGCGCT ACCTGGGTGG CTCCCTGGTG CGCAACGCCG TCCTGCGCAA GGAACGCGCG
GAACTCGCCG GTACCGCGCC CTCGGCCACC GACCGCTTTC TCGCGCGCTT CGCCCCCGCC
GGCCTTGAAG ACAAATCCTG A
 
Protein sequence
MKLTLTPPLT PSHWMRSTDL ADAASAPLVG THSADVAIVG GGFVGLWTAI TLKQLEPDAR 
VLLLEQDVCG GGASGRNGGF VMSWWPKIGT LLGFCNEAQA RFLGESAERA IQELGEFCAR
HDIDAHFQQK GWLWTATTAH HLDAWNDTLA ACERLGVSPF ERLDASEVAR RTGSPVHLAG
VFERSNATVQ PALLVQGMRR VALALGVEIH ERCGVSQIVP GQPAQLLSAG ARVQAKAVVL
ATNAWSAALP RLSRLIVPVN SSIAVTEAIP QRLERIGWTG GEAITDSQLM VDYYRTTRDG
RIAFGKGTGA ISYGSRIGRV FDVDRESLAL TEADFRRTYP SLGDIPLVDG WSGPIDRTYD
SLPVFGHLHE NIHYGIGWSG NGVGPSRLGG RILASLALGR DDPWSRCPLV ERRCRSFPPE
PLRYLGGSLV RNAVLRKERA ELAGTAPSAT DRFLARFAPA GLEDKS