Gene PA14_39480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_39480 
Symbol 
ID4385137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3513093 
End bp3515246 
Gene Length2154 bp 
Protein Length717 aa 
Translation table11 
GC content52% 
IMG OID639325733 
Producthypothetical protein 
Protein accessionYP_791302 
Protein GI116049889 
COG category[S] Function unknown 
COG ID[COG4694] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000519045 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA AAATTCTGCT TCGCAACGTC TCCAGCTACT CTCCAGACTC AGCGGTATCC 
ATTGCCCCGC TTAAGCGCGT GAGTTTGTTC TATGGCCATA ACGGGACGGG CAAGACCACT
ATCAGTAACT TCCTTCAGGC CCCTGATGAG GCCTGCTACA GCGTTTGCGG CGTGGAGCCA
GTAAAGGTTG GCCGGGAGAT CCTAGTCTAC AACCATGCAT TCATGGAGAA AAATTTCCAT
GAAGCCGCAT CCCAGCCAGG GGTCTTCACC CTCAATGAGG GCAACATTGA GGCGGAAGCT
GCCCTCGCAG TGGCCGAGAA AGCAATCGCT GAGCTGACGA TCGCCCATGA TACTGAAATG
GAGAAGGGCA TTAACTGCAA GAATGCTCAG CAGCAAGCTC ATGAGGCGCT ACTGGACAGT
GTATGGAAGC CTAAGCGTGG CTTCGATAAC ACCGCTTTGG CTTACTGCTT CAGGTCGCTC
AACACCAAAG AGCGTTTACT TGATGCAGTC CGAAGCGTCC AGCTTGTGGC AACCTCTGAC
ACCGCTCAGG GGCTACTCAG CGAGGCGGCA GAACTTAACG AGGCCAGTGA TAAAGAGCTG
CCCGGAATCG CGCCAATCAC CTTCCAGGCG GGTAAGCTAG AAACCGATCC GATCATGCAG
GAAGTCATCA CTGGGTCAGG CGATTCCTAC CTTTCTGCGT TCATTCAGCA ACTGGGAAAT
TCGGATTGGG TCAAGCAGGC ACTGCGCTAT GAGGTCGAGG CAAAAGACCA GTGCCCACTA
TGCCAGCAGT CCTTGCCGCA GGATTTCTAT ACTGAAATTC GTAAAGTCTT CGATAAAACC
TATCAGCAGC GCATTGATTT GCTGCAGCAA TTCGAAAGCC AATACCGAGA CGCGGTGGAT
CAATTTCTGC GACGGTACGA GGCTCCGGAA TATCAGCTGC AAGCCATAAA GCTCCGTGTC
ACCAGACTTC ACGCTGTCTT CCAGAAAAAC CTGCAATCCC TCGCTACAAA GCTCGCCAGT
CCATCCCTTA TGATTACGTT GGAGTCCACT GCAACATTGG TCGCAGAGTT GAACAGTGAG
ATCGCGGCTG AGCAACTGAA AATCGACGCT ATCAATGCGA GGATAAAAAA CAGGAAGCAG
CATGAGGAGG ACATCAAGCG ACGCTTCTGG AGCTGGTACA GAGCTTCGTG CGACGCGGCT
TTCGTGGCAT TCGAAAAGGT CGATAAGGAG CAGGGGCGCC AACGCCAGGC CGCCAAGGAT
GAGGTTCAGT CTCTGCGGGA TCGCATTCAG GCACAACGCG ATATCATTGC CCAATCCAGG
GCGGCCATCA GGAACATCGA CCAGTCGGTC GAGAGTATCA ATAATTGGTT GCGGGTGTTG
GGTCTGAAGG GCTTCGCGCT GATTAAAGAA GAGGGCCCGG TGCCACAATA TCGTCTTGAA
CGTCCTGGCC AGACTGAAGG GGTGTTCAGA ACGCTAAGTG AGGGCGAAAA AACGCTGATC
TCGTTCCTCT ACTTCCTTGA GGTCTGCAAT GGCGAGCTGG ACACAGCTAG TGGGACGCTC
AAGCGTGATC GCATCATCGT CATCGATGAC CCAATATCGA GCCTCTCCCA TAACTATGTC
TACGATATTG CGTCGCTGAT CAGGCGGCAG GTGCTCATCC CGAGAGACCG GTTCAAACAG
GTGATCATTC TGACGCACAA CCTTTTCTTC TTCCACGAAA TGGTCAAGCT CTTGAAGGAT
GACGGAGAAA AATCCTTGGC AATGTTCCGG ATCACCAAGT CCGAATACAG CTCGGTCGTG
ACCATGGAAG AGCGCGAAAT CCAGAACGAC TACCAAGCCT TCTGGCAAAC CATCAAGGAC
GCGTTGCAAG GCCGAACTTC CCCTAACGTG ATCCCGAACA TGATGCGCAA TATCTTGGAG
TACTACTTCA GCTTCGTGCA TCAGACGCAA AGCCTGCGCC AAGCGTTGAC TGATCTTAGC
GAGGAGAATC CAGAGTTCAG AGCGCTTTAC CGATACATCA ACCGTGAATC ACATGCTGAC
TCGGTTAACC TAACTGACTT CGGCGAGATC GATCCGGAGA TCTTCGTCGC GCGGTTTAAG
GATGTGTTCA TCAGAACCAA TTTCGAATCT CACTTCGACA AGATGATGGC ATAG
 
Protein sequence
MIEKILLRNV SSYSPDSAVS IAPLKRVSLF YGHNGTGKTT ISNFLQAPDE ACYSVCGVEP 
VKVGREILVY NHAFMEKNFH EAASQPGVFT LNEGNIEAEA ALAVAEKAIA ELTIAHDTEM
EKGINCKNAQ QQAHEALLDS VWKPKRGFDN TALAYCFRSL NTKERLLDAV RSVQLVATSD
TAQGLLSEAA ELNEASDKEL PGIAPITFQA GKLETDPIMQ EVITGSGDSY LSAFIQQLGN
SDWVKQALRY EVEAKDQCPL CQQSLPQDFY TEIRKVFDKT YQQRIDLLQQ FESQYRDAVD
QFLRRYEAPE YQLQAIKLRV TRLHAVFQKN LQSLATKLAS PSLMITLEST ATLVAELNSE
IAAEQLKIDA INARIKNRKQ HEEDIKRRFW SWYRASCDAA FVAFEKVDKE QGRQRQAAKD
EVQSLRDRIQ AQRDIIAQSR AAIRNIDQSV ESINNWLRVL GLKGFALIKE EGPVPQYRLE
RPGQTEGVFR TLSEGEKTLI SFLYFLEVCN GELDTASGTL KRDRIIVIDD PISSLSHNYV
YDIASLIRRQ VLIPRDRFKQ VIILTHNLFF FHEMVKLLKD DGEKSLAMFR ITKSEYSSVV
TMEEREIQND YQAFWQTIKD ALQGRTSPNV IPNMMRNILE YYFSFVHQTQ SLRQALTDLS
EENPEFRALY RYINRESHAD SVNLTDFGEI DPEIFVARFK DVFIRTNFES HFDKMMA