Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_39440 |
Symbol | |
ID | 4385140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3508418 |
End bp | 3510313 |
Gene Length | 1896 bp |
Protein Length | 631 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639325730 |
Product | hypothetical protein |
Protein accession | YP_791299 |
Protein GI | 116049892 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCACCG TGAAAAAGGC TCTGCTGGTT GTCGGCGTGA TCGTGCTGGC GGTCGTCGGG GTGGTGGTCT ACTACGTCGC CAATCCCAAC CTGCCCCACT ACCAGGCGCC GAGCGAGGTA CGCTACCTGC CGCAATGGAA GGACGAGGCC CGCCAGCGCT TCTACTACAC GCCCCAGGGC ACTCTGGTGA AGGGCCTGCA CTACGACTGG TTCACCGCCC TCGAACTGCC CTTCTCCGAA GAACCCTTCG CCGCCCCCGA ATACCTCGCC CGCTTCGGCT TCCTCGTCGA TCCGCAGCAG AAGGCCAGCG ACCTCAACCC CGGCAACCTG CCGGTGGGCT TCAGCCAGCA CCGCGACGAG AAGACCGGCA CCCGCTACCT GGACATCACC TGCGCCGCCT GCCACACCGG CGAACTGCGC TACCAGGGCA AGTCGCTACG CATCGACGGC GGTGCCGCCA TGCATTCCAT CGCCGCCACC GTGCCGACCC TGCGCGGCGG CGCCTTCGGC CAGGCGCTCG GCGCGAGCAT GGCCGCCACC TACTACAACC CGTTCAAGTT CAACCGCTTC GCCAGGAAAG TCCTCGGCGA ACGCTACGAA CAGGACAAGT CGCAACTGCG CGCCGACTTC AAGGCCGTGC TCGACACCCT CCTGCGCACC GCCTGGAACG ACACCCGCCG CCACCTCTAC CCCACCGAGG AAGGCCCCGG CCGCACCGAC GCCTTCGGGC GCATCGCCAA CAGCGTCTTC GGCGATGCCA TCGACCCGGG CAACTACCGC GTCGCCAACG CCCCGGTGAG CTATCCGCAG GTCTGGGACA TCTGGAAATT CGACTGGGTG CAATGGAACG GCTCGGCCAT GCAGCCGATG GCGCGCAACA TCGGCGAGGC CCTCGGCGTC GGCGCGCGCC TGCAGATCTT CGACGAGCAC GGCCAGCCGC TGCGGGGCGA GCAGCGCTAC GCCTCCAGCG TACGCCTGCA CGACCTGCAC GCCCTGGAAG AAACCCTGCA ACAGCTGAAA CCGCCGACCT GGCCGGAAGA CCTCTTCGGC CGCATCGACC TGCAACGCGC CTCCCAGGGC CGCGCCCTGT TCGAAGCCAA CTGCGCCTTC TGCCATGCAC CCAAGGTGCA ACCGGCGGAA TACGCCGCCC CCGGACGCAA TCCCGAGTGG CGCATGCACA TGGTGCCGAC CGAGGTGATC GGCACCGACC CGACCACCGC CGACAACATC GCCGACCACC GCTACGACCT GCGCAAGCTC GGCTGGAGCG TCGACGAACT GGCGCGGATG AACGTCCAGC TGATCGGCGC CGATCCGCAG CAACTCGACC TCTCGCAACT GTCCTCGGCC AAGGGCCTGG CCTACATCAC CGCCTTCGTC GAGCAGCGCG CCTACCGGGA CGCCGGCATC CCGCCGGAAC AGCAGAAGAC CATGAACGGC TTCGACCTAC CGATCGGCGT ACAGGAACTG CGCGCCTACA AGGCCCGCCC GCTGGACGGC GTCTGGGCGA CCCCGCCGTT CCTGCACAAC GGCTCGGTGC CCAACCTGTT CCAACTGCTC TCCCCGGCCG CCGAACGCTC GCCGCAGTTC TACGTCGGCA CCTTCGAATT CGATCCGAAA TTCGTTGGAT TCCGCACCGA GAAATTCCCC GGCGGCTTCC TCCTCGACAC CCGTCTCACC GGCAACCGCA ACAGCGGCCA CGAATTCCGC GACGGCTGCC GGCAGAACGG CGTGATCGGC CGCGCCCTCA GCCCGGAAGA ACGCTGGGCG CTGGTGGAAT ACCTGAAGGT GCTCGGCAAC CCCGAGTTCG AGCGCCGCCT GGTCCCGGCC CAGACCCCAC CCTGGACGCC CGGCCCGAAA TGCCCGGCGC CGGAGCAACG GACCGCGCAA CGCTGA
|
Protein sequence | MRTVKKALLV VGVIVLAVVG VVVYYVANPN LPHYQAPSEV RYLPQWKDEA RQRFYYTPQG TLVKGLHYDW FTALELPFSE EPFAAPEYLA RFGFLVDPQQ KASDLNPGNL PVGFSQHRDE KTGTRYLDIT CAACHTGELR YQGKSLRIDG GAAMHSIAAT VPTLRGGAFG QALGASMAAT YYNPFKFNRF ARKVLGERYE QDKSQLRADF KAVLDTLLRT AWNDTRRHLY PTEEGPGRTD AFGRIANSVF GDAIDPGNYR VANAPVSYPQ VWDIWKFDWV QWNGSAMQPM ARNIGEALGV GARLQIFDEH GQPLRGEQRY ASSVRLHDLH ALEETLQQLK PPTWPEDLFG RIDLQRASQG RALFEANCAF CHAPKVQPAE YAAPGRNPEW RMHMVPTEVI GTDPTTADNI ADHRYDLRKL GWSVDELARM NVQLIGADPQ QLDLSQLSSA KGLAYITAFV EQRAYRDAGI PPEQQKTMNG FDLPIGVQEL RAYKARPLDG VWATPPFLHN GSVPNLFQLL SPAAERSPQF YVGTFEFDPK FVGFRTEKFP GGFLLDTRLT GNRNSGHEFR DGCRQNGVIG RALSPEERWA LVEYLKVLGN PEFERRLVPA QTPPWTPGPK CPAPEQRTAQ R
|
| |