Gene PA14_38990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_38990 
Symbol 
ID4382772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3473759 
End bp3474922 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content68% 
IMG OID639325696 
Producthypothetical protein 
Protein accessionYP_791265 
Protein GI116049926 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.880326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.566256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAAG GGCAGGGGGA AGGGGTCTGC AGGGGCATGT CCAGCGCCCG CGACGTCGAA 
GTGGTGGCCC AGGACCTGGC GCGCCAGCTT ATCCATCCGC ACCTGGGCTT CGTGCTGTTC
TTCTGTTCCG CGGAATACGA CCTGCCGGCC CTCGGCGAGA TGCTCGAACG CTACTTCGGC
GGCATCGACC TGGTCGGTTG CACCACCGCC GGCGAGATCA CTCCGGCGGG CTACGGGCGC
GGCTGCGTCA GCGCGGTGGG CTTCGACGTG CGCAGCTTCG CCATCAGCAG CGCGCTGATC
GACGAAATGG AGCGCTTCAG CCTGCTGGAC GCGCAGCAGA TGGTCGAGAC CCTGGTGGCC
GGCTGTCGCC GCGGCGGCCT GGCGCCGATC AAGGACCACA GCTTCGCCCT GACCCTGCTC
GACGGCCTGT CCAGCCGCGA AGAGGTGGTG CTCGCCGCGC TTGGCGCGGC GCTCGGCGCG
ATCCCGCATT TCGGTGGCTC GGCCGGCGAC GACCGGCACC TGACCCACAC CCATGTCTAC
CACCAGGGCC AGTTCCATAC CGGGGCGGCA GTGGTGGTGC TGGTCAACAC CTGGCTGGAC
TTCGAGGTCT TCACCACCCA TCACGTGGTG CCGCGCGCCG AAAAGTTGGT GGTGACCCGC
GCCGACAGCG GCAGCCGGCG GGTCCACGAA CTCAACGCCG AGCCGGCGGC GCTGGAATAC
GCCCGGCTGG TCGGGGTGGC ACCGCAGGCG CTGGATTTCG CCCTGTTCTC CGCGCATCCG
CTGGCGGTGC GGGTCGACGA ACGCTATTAC GTGCGCTCGA TCCAGCAGGC CAACGAGGAC
CTGAGCCTGA CGTTCTACTG TGCGGTGGAG AACGGCATCG TTCTCACCGC GATGAGCACC
GGCCCGCTGT TGCCCAACCT GGAGGCGCAG TTCCGCCGCC TCCACGAGCG CCTCGGACCG
CCGTTGCTGA CCATCGGTTG CGACTGCTTC CTGCGGCGCC TGGAGCTGGA GGTCGGCGGT
GACACGCAAG CTACCGCCGC GTTTCTCCGC AGCCAGCAGG TGATCGGCTT CAACACCTAC
GGAGAGCAAT TCAATGGCAT GCATATCAAC CAGACCTTCA CCGGGGTCGC CATTGGCCGA
CCCCGTGGAG GTGTCCGTCG CTGA
 
Protein sequence
MYEGQGEGVC RGMSSARDVE VVAQDLARQL IHPHLGFVLF FCSAEYDLPA LGEMLERYFG 
GIDLVGCTTA GEITPAGYGR GCVSAVGFDV RSFAISSALI DEMERFSLLD AQQMVETLVA
GCRRGGLAPI KDHSFALTLL DGLSSREEVV LAALGAALGA IPHFGGSAGD DRHLTHTHVY
HQGQFHTGAA VVVLVNTWLD FEVFTTHHVV PRAEKLVVTR ADSGSRRVHE LNAEPAALEY
ARLVGVAPQA LDFALFSAHP LAVRVDERYY VRSIQQANED LSLTFYCAVE NGIVLTAMST
GPLLPNLEAQ FRRLHERLGP PLLTIGCDCF LRRLELEVGG DTQATAAFLR SQQVIGFNTY
GEQFNGMHIN QTFTGVAIGR PRGGVRR