| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_38860 |
|---|
| Symbol | exaA |
|---|
| ID | 4382780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 3465040 |
|---|
| End bp | 3466911 |
|---|
| Gene Length | 1872 bp |
|---|
| Protein Length | 623 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639325688 |
|---|
| Product | quinoprotein alcohol dehydrogenase |
|---|
| Protein accession | YP_791257 |
|---|
| Protein GI | 116049934 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4993] Glucose dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAA GAACCTCACC CGCCCCTGCC GGCCTCCTGC GCCCGAGCCT GCACTGCCTC
GCCTTCGCCG TCGCCCTGGG CAGCGCTGGC GCCGCGCTGG CCAAGGATGT GACCTGGGAG
GACATCGCCA ACGACGACAA GACCACCGGC GACGTGCTGC AGTACGGCAT GGGCACCCAC
GCCCAGCGCT GGAGCCCGCT CAAGCAGGTC AACGCCGACA ACGTGTTCAA GCTGACCCCG
GCCTGGTCGT ACTCCTTCGG CGACGAGAAA CAGCGCGGCC AGGAGTCCCA GGCCATCGTC
AGCGACGGCG TGATCTACGT GACCGCCTCC TACTCGCGGC TGTTCGCCCT CGACGCGAAG
ACCGGCAAGC GCCTGTGGAC CTACAACCAC CGCCTGCCCG ACGACATCCG CCCGTGCTGC
GACGTGGTCA ACCGCGGCGC CGCGATCTAT GGCGACAAGG TGTTCTTCGG CACCCTCGAC
GCCTCGGTGG TGGCGCTGAA CAAGAACACC GGCAAGGTGG TGTGGAAGAA GAAGTTCGCC
GATCACGGCG CCGGCTACAC CATGACTGGC GCGCCGACCA TCGTGAAGGA CGGCAAGACC
GGCAAGGTCC TGCTGATCCA CGGCAGTTCG GGCGACGAGT TCGGCGTGGT CGGCCGCCTG
TTCGCCCGCG ATCCGGATAC CGGCGAGGAA ATCTGGATGC GTCCCTTCGT CGAAGGCCAC
ATGGGCCGCC TGAACGGCAA GGACAGCACG GTGACCGGCG ACGTCAAGGC GCCCTCCTGG
CCGGACGATC GCAACTCGCC GACCGGCAAG GTCGAGTCTT GGAGCCACGG CGGCGGCGCT
CCCTGGCAGA GCGCCAGCTT CGACGCCGAG ACCAACACCA TCATCGTCGG CGCCGGCAAC
CCCGGCCCGT GGAACACCTG GGCGCGCACC GCCAAGGGCG GCAACCCGCA CGACTACGAC
AGCCTCTACA CCTCCGGCCA GGTCGGAGTG GACCCGAGCA GCGGCGAGGT GAAGTGGTTC
TACCAGCACA CCCCCAACGA CGCCTGGGAC TTCTCCGGCA ACAACGAACT GGTGCTGTTC
GACTACAAGG CCAAGGACGG CAAGATCGTC AAGGCCACCG CCCACGCCGA CCGCAACGGC
TTCTTCTATG TGGTCGACCG CAGCAACGGC AAGTTGCAGA ACGCTTTCCC CTTCGTCGAC
AACATCACCT GGGCCAGCCA CATCGACCTG AAGACCGGCC GCCCGGTGGA GCGCGAGGGC
CAGCGCCCGC CGCTGCCGGA ACCGGGGCAG AAGCATGGCA AGGCGGTGGA AGTATCGCCG
CCGTTCCTCG GCGGCAAGAA CTGGAACCCG ATGGCCTACA GCCAGGACAC CGGCCTGTTC
TACGTGCCGG CCAACCACTG GAAGGAAGAC TACTGGACCG AGGAGGTCAG CTATACGAAG
GGCAGCGCCT ACCTGGGCAT GGGCTTCCGG ATCAAGCGCA TGTACGACGA CCACGTCGGC
AGCCTGCGCG CCATGGACCC GCTCAGCGGC AAGCTGGTCT GGGAACACAA GGAACACCTG
CCGCTCTGGG CCGGGGTGCT GGCCACCGCC GGCAACCTGG TGTTCACCGG CACCGGCGAC
GGCTACTTCA AGGCCTTCGA CGCGAAGAGC GGCAAGGAGC TGTGGAAATT CCAGACCGGC
AGCGGCATCG TCTCGCCACC GATCACCTGG GAACAGGACG GCGAGCAGTA CCTCGGCGTG
ACCGTCGGCT ACGGCGGCGC CGTGCCGCTG TGGGGCGGCG ACATGGCCGA CCTGACCCGG
CCGGTGGCCC AGGGCGGTTC CTTCTGGGTA TTCAAGCTGC CCAGCTGGGA CAACCGCACC
GCCAGCCGCT GA
|
|---|
| Protein sequence | MTTRTSPAPA GLLRPSLHCL AFAVALGSAG AALAKDVTWE DIANDDKTTG DVLQYGMGTH
AQRWSPLKQV NADNVFKLTP AWSYSFGDEK QRGQESQAIV SDGVIYVTAS YSRLFALDAK
TGKRLWTYNH RLPDDIRPCC DVVNRGAAIY GDKVFFGTLD ASVVALNKNT GKVVWKKKFA
DHGAGYTMTG APTIVKDGKT GKVLLIHGSS GDEFGVVGRL FARDPDTGEE IWMRPFVEGH
MGRLNGKDST VTGDVKAPSW PDDRNSPTGK VESWSHGGGA PWQSASFDAE TNTIIVGAGN
PGPWNTWART AKGGNPHDYD SLYTSGQVGV DPSSGEVKWF YQHTPNDAWD FSGNNELVLF
DYKAKDGKIV KATAHADRNG FFYVVDRSNG KLQNAFPFVD NITWASHIDL KTGRPVEREG
QRPPLPEPGQ KHGKAVEVSP PFLGGKNWNP MAYSQDTGLF YVPANHWKED YWTEEVSYTK
GSAYLGMGFR IKRMYDDHVG SLRAMDPLSG KLVWEHKEHL PLWAGVLATA GNLVFTGTGD
GYFKAFDAKS GKELWKFQTG SGIVSPPITW EQDGEQYLGV TVGYGGAVPL WGGDMADLTR
PVAQGGSFWV FKLPSWDNRT ASR
|
|---|
| |