Gene PA14_38680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_38680 
Symbol 
ID4380283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3448793 
End bp3449713 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content69% 
IMG OID639325672 
ProductLysR family transcriptional regulator 
Protein accessionYP_791241 
Protein GI116049949 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCA AGCAGTTGCG CGCCTTCCTC GCCGTGGCGC AGAGCCTCAG CTTCGCCCAG 
GCCGGCGAAC GCCTGCACCT CTCCCAGCCG GCCCTGAGCC TGGCGATCAA GAGCCTGGAG
GAAAGCCTCG GCGGTCCGCT GCTGGAACGT ACCACCCGCA GCGTCAGCCT CACCCCCGAG
GGCGAGACCC TGCTGCCGCT GGCGCTGCGC CTGCTGGCCG ACTGGGACAA TACCGAGGAA
TTGCTGCGCC AGCACTTCAC CCTGCAACTG GGCAAGGTCT CCATCGCCGC CATGCCCTCC
TTCGCCGGCA ACCTGCTGCC GCTGGTCTTG AAGACCTTTC GCGAACGCCA CCCGCGGGTC
AACGTGGCGG TGCACGACGT GATCAACGAG CAGGTGCTGG AGATGGTCCG CAACCGACGC
GTCGAGCTGG GCATCGCCTT CGAGCCGGAG TCCCTGGAAA ACCTCGAGTT CACCCCGTTC
TACAGCGACC GCTTCGTCGC CGTGGTGCCG ACCGGCTCGC CGCTGTCCGG GCAGGAGCGG
ATCAGTTGGC GCGAACTGCT CGGCGAGCCC TTCATTACCC TGCAACGCCC CTCGGCGGTG
CGCCTGCTCC TGGAAGAAAG CGTGGCCGCC GAGCACGGCC GCTTGCCGGT GGCGTTCGAG
AGCCACCAAC TGGTCACGGT CGGGCGGATG GTCGCCCAGG GACTGGGTGT CAGCGCCGTG
CCGACCCTGT GCATCCAGCA GATGCAGGAA CTCGGCGCGC GCTGCCTGCC GCTCTACGCG
CCGCAGGTGC AGCGACGGGT CGGCCTGCTG CGGCTGAGCG AGCACAAGCT GTCCACCGCC
GCCCAGGCCC TCAGCGACGT GCTGCTGCAT GGCACCGACT GGCGCTCGCT GGCGCTGCCG
CAGGACCAGT CCACGGAGTG A
 
Protein sequence
MTVKQLRAFL AVAQSLSFAQ AGERLHLSQP ALSLAIKSLE ESLGGPLLER TTRSVSLTPE 
GETLLPLALR LLADWDNTEE LLRQHFTLQL GKVSIAAMPS FAGNLLPLVL KTFRERHPRV
NVAVHDVINE QVLEMVRNRR VELGIAFEPE SLENLEFTPF YSDRFVAVVP TGSPLSGQER
ISWRELLGEP FITLQRPSAV RLLLEESVAA EHGRLPVAFE SHQLVTVGRM VAQGLGVSAV
PTLCIQQMQE LGARCLPLYA PQVQRRVGLL RLSEHKLSTA AQALSDVLLH GTDWRSLALP
QDQSTE