Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_38680 |
Symbol | |
ID | 4380283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3448793 |
End bp | 3449713 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325672 |
Product | LysR family transcriptional regulator |
Protein accession | YP_791241 |
Protein GI | 116049949 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCA AGCAGTTGCG CGCCTTCCTC GCCGTGGCGC AGAGCCTCAG CTTCGCCCAG GCCGGCGAAC GCCTGCACCT CTCCCAGCCG GCCCTGAGCC TGGCGATCAA GAGCCTGGAG GAAAGCCTCG GCGGTCCGCT GCTGGAACGT ACCACCCGCA GCGTCAGCCT CACCCCCGAG GGCGAGACCC TGCTGCCGCT GGCGCTGCGC CTGCTGGCCG ACTGGGACAA TACCGAGGAA TTGCTGCGCC AGCACTTCAC CCTGCAACTG GGCAAGGTCT CCATCGCCGC CATGCCCTCC TTCGCCGGCA ACCTGCTGCC GCTGGTCTTG AAGACCTTTC GCGAACGCCA CCCGCGGGTC AACGTGGCGG TGCACGACGT GATCAACGAG CAGGTGCTGG AGATGGTCCG CAACCGACGC GTCGAGCTGG GCATCGCCTT CGAGCCGGAG TCCCTGGAAA ACCTCGAGTT CACCCCGTTC TACAGCGACC GCTTCGTCGC CGTGGTGCCG ACCGGCTCGC CGCTGTCCGG GCAGGAGCGG ATCAGTTGGC GCGAACTGCT CGGCGAGCCC TTCATTACCC TGCAACGCCC CTCGGCGGTG CGCCTGCTCC TGGAAGAAAG CGTGGCCGCC GAGCACGGCC GCTTGCCGGT GGCGTTCGAG AGCCACCAAC TGGTCACGGT CGGGCGGATG GTCGCCCAGG GACTGGGTGT CAGCGCCGTG CCGACCCTGT GCATCCAGCA GATGCAGGAA CTCGGCGCGC GCTGCCTGCC GCTCTACGCG CCGCAGGTGC AGCGACGGGT CGGCCTGCTG CGGCTGAGCG AGCACAAGCT GTCCACCGCC GCCCAGGCCC TCAGCGACGT GCTGCTGCAT GGCACCGACT GGCGCTCGCT GGCGCTGCCG CAGGACCAGT CCACGGAGTG A
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Protein sequence | MTVKQLRAFL AVAQSLSFAQ AGERLHLSQP ALSLAIKSLE ESLGGPLLER TTRSVSLTPE GETLLPLALR LLADWDNTEE LLRQHFTLQL GKVSIAAMPS FAGNLLPLVL KTFRERHPRV NVAVHDVINE QVLEMVRNRR VELGIAFEPE SLENLEFTPF YSDRFVAVVP TGSPLSGQER ISWRELLGEP FITLQRPSAV RLLLEESVAA EHGRLPVAFE SHQLVTVGRM VAQGLGVSAV PTLCIQQMQE LGARCLPLYA PQVQRRVGLL RLSEHKLSTA AQALSDVLLH GTDWRSLALP QDQSTE
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