Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_38560 |
Symbol | |
ID | 4380291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3438790 |
End bp | 3440142 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639325664 |
Product | putative MFS transporter |
Protein accession | YP_791233 |
Protein GI | 116049957 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.020424 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAACC AGATCGCCAG CTTTCGCGCG GCGCTCGACG CGCGCCCCGT GTCCCGCTAC CAGTGGCTGT TGCTGCTGCT CCTCGCCCTG TTGCTGGTCA CCGATGGCTA CGATGCCCAG GTGCTCGGCT ACGTGGTGCC GACCCTGGCC CAGGAATGGG GCCTGGACAA GGCCGCGTTC GGCCCGGTGT TCAGCGCCAA CCTGTTCGGC CTGACCGTCG GTTCGCTGCT GGTGACGCCG CTGGCGGACC GCTTCGGCAT CCGCCGGGTG CTGCTCTGCT GCGTGCTGAT CTACGCCAGC CTGACCGTCC TGATGGTCTT CGCCGGTTCC CTGGAAAACC TGATGCTGGC GCGCTTCGTC TGCGGCATCG GAATGGGCGG GGCGATGCCC AGCGCCATGG CGCTGATGGC CGAGTATTCG CCACCGCGCC TGCGTACCCT GATGGTCACC CTGGCGGCCT GCGGTTTCTC CTTCGGCGGC GCCGCCGGCG GTTTCGTCGC CGCCGCCTTC ATGGACGGCT TCGGCTGGCA GGCGGTGTTC CTCGCCGGCG GCGTCACCCC GTTGCTGCTG TTCCCCTTCC TCCTCCTGTT CCTCCCGGAG TCGCTGCCGC GCCTGCTCCG CGACGCACCG CCCTATGCCC GCCTGCGCCA GCTCAGCGAG CGTATGGCGC CGGGCTGGCA GCCGCCGCCG GCACAGGCCG ACGCCGAGCC GGCGGCGAGC CTGACCGTGC TGGAGCTGTT CCGCCACGGT TACGCGCGGC CGACCCTGCT GCTCTGGGCG ACCTTCTTCG TCAGCCTGAT CCTGCTCTAC TTCATGGTCA GCTGGCTGCC CTCGCTGCTC CAGGAAAGCG GCCTGACACG CAATGCGGCG AACCTGGCGA CCTCGATGTT CCTCTTCGCC GGCACCCTCG GCGCGATGCT CCTGGCCTGG CTCGCCGACC GCCTGCGCAG CAAGGTCCGC CTGCTGGCGG CGATTCTCGC CGGCGCCGCG CTGTTCACCC TGCTCCTCGG CCTCAACCAC GACCAGCCGC GCTGGCTGCT GGCGTTCGTC TTCGCCGCCG GCTTCTGCAT CATCGGCGGG CAGTTGACCC TGAACGCCTT CGCCAGCAAC TTCTACCCGG CCCAGGTACG CGCCACCGGC ACCGGCTGGG CGCTGGGCGT GGGCCGCTTC GGTTCGATCC TCGGCCCACT GTTCGGCAGC CTGCTGCTGG GCATGCACAT ATCCGTGGAG AACATCTTCA TGCTTGCGGC GATTCCCGCC GGGCTCGCCG CACTACTGAT CCTCCAGGTC CGCTCGCCCG CCGCCCAGGC GCAGCGGGAA AGCGCCGCCG CGCTGGCCGT CGAGGAATCC TGA
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Protein sequence | MHNQIASFRA ALDARPVSRY QWLLLLLLAL LLVTDGYDAQ VLGYVVPTLA QEWGLDKAAF GPVFSANLFG LTVGSLLVTP LADRFGIRRV LLCCVLIYAS LTVLMVFAGS LENLMLARFV CGIGMGGAMP SAMALMAEYS PPRLRTLMVT LAACGFSFGG AAGGFVAAAF MDGFGWQAVF LAGGVTPLLL FPFLLLFLPE SLPRLLRDAP PYARLRQLSE RMAPGWQPPP AQADAEPAAS LTVLELFRHG YARPTLLLWA TFFVSLILLY FMVSWLPSLL QESGLTRNAA NLATSMFLFA GTLGAMLLAW LADRLRSKVR LLAAILAGAA LFTLLLGLNH DQPRWLLAFV FAAGFCIIGG QLTLNAFASN FYPAQVRATG TGWALGVGRF GSILGPLFGS LLLGMHISVE NIFMLAAIPA GLAALLILQV RSPAAQAQRE SAAALAVEES
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