| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_38510 |
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| Symbol | hmgA |
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| ID | 4380294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 3435469 |
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| End bp | 3436767 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639325661 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_791230 |
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| Protein GI | 116049960 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00419964 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCG ACTCCACTGC CCTCGCCTAT CAATCGGGCT TCGGCAACGA ATTCAGCAGC
GAAGCGCTCC CCGGCGCCCT GCCGGTCGGC CAGAACTCCC CGCAGAAAGC GCCCTACGGC
CTGTACGCCG AACTGCTCTC CGGCACCGCC TTCACCATGG CTCGCAGCGA GGCCCGGCGC
ACCTGGCTAT ACCGCATCAC GCCGTCGGCC AAGCATCCGC CGTTCCGCCG CCTGGAACGA
CAGATCGCCG GTGCCGAACT GGATGCGCCG ACCCCCAACC GCCTGCGCTG GGACCCGCTG
GCACTGCCCG AGCAGCCCAC CGACTTCCTC GACGGCCTGC TGCGCATGGC CGCCAACGCG
CCCGGCGACA AGCCCGCCGG CGTGAGCATC TACCAGTACC TGGCCAACCG CTCGATGGAG
CGTTGCTTCT ACGACGCCGA CGGCGAACTG CTGCTGGTCC CGCAGTTGGG CCGCCTGCGC
CTGTGCACCG AACTCGGCGC GCTGCAGGTC GAACCGCTGG AGATCGCGGT GATCCCGCGC
GGGATGAAGT TCCGCGTCGA GCTGCTCGAC GGCGAGGCAC GCGGCTATAT CGCCGAGAAC
CACGGCGCGC CGCTGCGCCT GCCCGACCTC GGCCCGATCG GCAGCAATGG CCTGGCCAAT
CCGCGCGACT TCCTGGCCCC GGTGGCGCGC TACGAAGACA GCCGCCAGCC GCTGCAACTG
GTGCAGAAAT ACCTCGGCGA GCTGTGGGCC TGCGAGCTTG ACCACTCGCC GCTGGACGTG
GTCGCCTGGC ACGGCAACAA CGTGCCCTAC AAGTACGACC TGCGCCGCTT CAACACCATC
GGCACGGTCA GCTTCGACCA CCCGGACCCG TCGATCTTCA CCGTGCTGAC CTCCCCCACC
AGCGTCCATG GCCTGGCCAA CATCGACTTC GTGATCTTCC CGCCGCGCTG GATGGTGGCC
GAGAACACCT TCCGTCCGCC ATGGTTCCAC CGCAACCTGA TGAACGAGTT CATGGGCCTG
ATCCAGGGCG CCTATGACGC CAAGGCCGGC GGCTTCGTGC CTGGCGGCGC CTCGCTGCAC
AGTTGCATGA GCGCCCACGG CCCGGACGCG GAAAGCTGCG ACAAGGCCAT CGCCGCCGAC
CTCAAGCCGC ACAGGATCGA CCAGACCATG GCCTTCATGT TCGAGACCAG CCAGGTCCTC
CGGCCGAGCC GTGCCGCCCT CGAGACGCCG GCCCTGCAGA ATGACTACGA TGCCTGCTGG
GCGTCGCTCG TATCCACCTT CAACCCGCAA CGGAGATAA
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| Protein sequence | MNLDSTALAY QSGFGNEFSS EALPGALPVG QNSPQKAPYG LYAELLSGTA FTMARSEARR
TWLYRITPSA KHPPFRRLER QIAGAELDAP TPNRLRWDPL ALPEQPTDFL DGLLRMAANA
PGDKPAGVSI YQYLANRSME RCFYDADGEL LLVPQLGRLR LCTELGALQV EPLEIAVIPR
GMKFRVELLD GEARGYIAEN HGAPLRLPDL GPIGSNGLAN PRDFLAPVAR YEDSRQPLQL
VQKYLGELWA CELDHSPLDV VAWHGNNVPY KYDLRRFNTI GTVSFDHPDP SIFTVLTSPT
SVHGLANIDF VIFPPRWMVA ENTFRPPWFH RNLMNEFMGL IQGAYDAKAG GFVPGGASLH
SCMSAHGPDA ESCDKAIAAD LKPHRIDQTM AFMFETSQVL RPSRAALETP ALQNDYDACW
ASLVSTFNPQ RR
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